Protein Alignment Rnf148 and rnf128a

DIOPT Version :9

• Sequence 1: NP_001178011.1
• Gene: Rnf148 / 681407
• RGDID: 1595417
• Length: 316
• Species: Rattus norvegicus
• Sequence 2: NP_997780.1
• Gene: rnf128a / 322325
• ZFINID: ZDB-GENE-030131-1044
• Length: 389
• Species: Danio rerio
• Alignment Length: 304
• Identity: 150/304 - (49%)
• Similarity: 193/304 - (63%)
• Gaps: 11/304 - (3%)

  Rat    21 PSAHRSVSSRLLRLSVFLLLSLPDTKGKAIWTAHLNITF--QVGNRIISELGESGVFGNHSPLER 83
            |.|.|.|.|.||..||..:.|:...:...:.||:|||::  ...||......|.|::|..||...
Zfish     3 PLASRDVFSWLLLASVLQVSSVRLAEASYLCTAYLNISYTNPENNRSTWFQEEMGLYGQDSPKAY 67

  Rat    84 VSGAVVLPEGWNQNACSPLTNFSRPDQADSWLALIERG-GCTFTHKINVAAEKGANGVIIYNYPG 147
            |.|.|.|..  ....|...|.:.||:.:..|:|||:|| |||||.|||:||..||...||:|..|
Zfish    68 VKGNVYLAS--PTYGCDDDTFYGRPNGSKGWIALIQRGNGCTFTEKINIAAMNGAAAAIIFNDFG 130

  Rat   148 TGNKVFPMSHQGTENIVAVMIGNLKGMELLHLIQQGVYVTIIIEVGRMHMPWLSHY-----VMSL 207
            :.|:|..|||.|| .|||:||||.:||||:.|:.|||.|.|.||||:.|.||:|||     .:|.
Zfish   131 SENRVIQMSHPGT-TIVAIMIGNYRGMELVQLLDQGVPVAIAIEVGKQHGPWMSHYSVFFVSISF 194

  Rat   208 FTFLAATVAYLFLYCAWRPRAPNSSTRRQRQIKSDVKKAIGQLQLRVLKEGDKELDPNEDSCVVC 272
            |...||||.|...|.|.|..:.....|.|:::|::.||||||||:|.|::||:|:.|:.|:|.||
Zfish   195 FIVTAATVGYFIFYSARRLNSLRQQNRSQKKLKAEAKKAIGQLQVRTLRQGDQEIGPDADACAVC 259

  Rat   273 FDIYKAQDVIRILTCKHFFHKTCIDPWLLAHRTCPMCKCDILRS 316
            .|.|||.||:.||||.|||||:||:||||.||||||||||||::
Zfish   260 IDSYKAGDVLSILTCNHFFHKSCIEPWLLEHRTCPMCKCDILKA 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf148	NP_001178011.1	PA_GRAIL_like	56..190	CDD:239037	63/136 (46%)
		zf-RING_2	267..310	CDD:290367	31/42 (74%)
rnf128a	NP_997780.1	PA_GRAIL_like	38..172	CDD:239037	63/136 (46%)
		zf-RING_2	256..297	CDD:290367	30/40 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	83	1.000	Domainoid score	I27761
eggNOG	1	0.900	-	-		E1_KOG4628
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22765
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	7	6.880