Protein Alignment Rnf148 and rnf128

DIOPT Version :9

• Sequence 1: NP_001178011.1
• Gene: Rnf148 / 681407
• RGDID: 1595417
• Length: 316
• Species: Rattus norvegicus
• Sequence 2: XP_012824820.2
• Gene: rnf128 / 100145171
• XenbaseID: XB-GENE-877067
• Length: 403
• Species: Xenopus tropicalis
• Alignment Length: 291
• Identity: 154/291 - (52%)
• Similarity: 197/291 - (67%)
• Gaps: 9/291 - (3%)

  Rat    34 LSVFLLLSLPDTKGKAIWTAHLNITFQVGNRIISELGESGVFGNHSPLERVSGAVVLPEGWNQ-N 97
            |...|||:|..|....:|||::|.::...||...|.||.||||..||:||.:|.||||:.... .
 Frog    16 LPALLLLNLSLTGADTLWTANVNYSYVYDNRTYGEEGEIGVFGQDSPIERAAGLVVLPKSERTFT 80

  Rat    98 ACSPLTNFSRPDQADS-WLALIER-GGCTFTHKINVAAEKGANGVIIYNYPGTGNKVFPMSHQGT 160
            ||...||||.|...:. |:|||.| ||||||.|||.|||:||..|::|| .|..|:||.|||.||
 Frog    81 ACKDNTNFSVPHNWNGPWIALILRGGGCTFTEKINRAAERGARAVVVYN-NGMDNEVFEMSHPGT 144

  Rat   161 ENIVAVMIGNLKGMELLHLIQQGVYVTIIIEVGRMHMPWLSHY-----VMSLFTFLAATVAYLFL 220
            ::.||:||||:||.|::.:|:.|:.|.::|||||.|..|::||     .:|.|...||||.|...
 Frog   145 KDTVAIMIGNIKGNEIVEVIKGGMQVMMVIEVGRKHGSWINHYSIFFVSVSFFIVTAATVGYFIF 209

  Rat   221 YCAWRPRAPNSSTRRQRQIKSDVKKAIGQLQLRVLKEGDKELDPNEDSCVVCFDIYKAQDVIRIL 285
            |.|.|.|...:..::.:|:|::.|||||:||||.:|:|||.|.|:.|||.||.:.||..||:|||
 Frog   210 YSARRWRLTRAQNKKMKQLKAEAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRIL 274

  Rat   286 TCKHFFHKTCIDPWLLAHRTCPMCKCDILRS 316
            ||.|||||.|||||||.||||||||||||:|
 Frog   275 TCNHFFHKNCIDPWLLEHRTCPMCKCDILKS 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf148	NP_001178011.1	PA_GRAIL_like	56..190	CDD:239037	69/136 (51%)
		zf-RING_2	267..310	CDD:290367	32/42 (76%)
rnf128	XP_012824820.2	PA_GRAIL_like	38..174	CDD:239037	69/136 (51%)
		COG5540	<208..302	CDD:227827	56/93 (60%)
		RING-H2_RNF128_like	256..304	CDD:319716	37/47 (79%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	60	1.000	Domainoid score	I36242
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22765
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.020