Protein Alignment Rnf133 and rnf128a

DIOPT Version :9

• Sequence 1: NP_001037743.1
• Gene: Rnf133 / 681395
• RGDID: 1596695
• Length: 381
• Species: Rattus norvegicus
• Sequence 2: NP_997780.1
• Gene: rnf128a / 322325
• ZFINID: ZDB-GENE-030131-1044
• Length: 389
• Species: Danio rerio
• Alignment Length: 384
• Identity: 163/384 - (42%)
• Similarity: 226/384 - (58%)
• Gaps: 38/384 - (9%)

  Rat     7 GPWQTSAPSFWLLKFSFIWLVSQNCCTASAVWTAYMNISF--HVGNRMLSELGETGVFGRSSILK 69
            ||..:.....|||..|.:.:.|.....||.:.|||:|||:  ...||......|.|::|:.|...
Zfish     2 GPLASRDVFSWLLLASVLQVSSVRLAEASYLCTAYLNISYTNPENNRSTWFQEEMGLYGQDSPKA 66

  Rat    70 RVAGVVV---PPEGKIQNACDPNTSFILPRNKEPWIALIERG-GCAFTQKIKVASENGARGVIIY 130
            .|.|.|.   |..|     ||.:|.:..|...:.|||||:|| ||.||:||.:|:.|||...||:
Zfish    67 YVKGNVYLASPTYG-----CDDDTFYGRPNGSKGWIALIQRGNGCTFTEKINIAAMNGAAAAIIF 126

  Rat   131 NFPGTGNQVFPMSHQAFEDIVVVMIGNVKGMEILHLIRKGVHVTVMVEVGRKHVIWLNHYFV--- 192
            |..|:.|:|..|||.. ..||.:||||.:|||::.|:.:||.|.:.:|||::|..|::||.|
Zfish   127 NDFGSENRVIQMSHPG-TTIVAIMIGNYRGMELVQLLDQGVPVAIAIEVGKQHGPWMSHYSVFFV 190

  Rat   193 --SFMIVTTATLAYFTFYHIRRLWVARIEDRRWKRLTRELKKAFGQLQVRILKEGDEEVSPNADS 255
              ||.|||.||:.||.||..|||...|.::|..|:|..|.|||.||||||.|::||:|:.|:||:
Zfish   191 SISFFIVTAATVGYFIFYSARRLNSLRQQNRSQKKLKAEAKKAIGQLQVRTLRQGDQEIGPDADA 255

  Rat   256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDILKALGIQMDIEDGSDSLQVL 320
            |.:|.::||..:::.||||.|||||:||:||:|.|.||||||||||||||:::|:|   :..|:.
Zfish   256 CAVCIDSYKAGDVLSILTCNHFFHKSCIEPWLLEHRTCPMCKCDILKALGVELDVE---EQPQIS 317

  Rat   321 MSNELPGTFSAMEEELNNELPPARTSSKVT-------HVQEHPTSVNVGSQPPEAEETG 372
            :.:..|  ||. .|:|::| ..:.|.|:..       |..||       ..|||....|
Zfish   318 VPDFRP--FST-SEDLHSE-TASHTHSETASSGYASMHGNEH-------LAPPEGTHNG 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf133	NP_001037743.1	PA_GRAIL_like	43..177	CDD:239037	57/139 (41%)
		HRD1	<183..>368	CDD:227568	89/196 (45%)
		RING-H2_RNF128_like	254..302	CDD:319716	29/47 (62%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	340..381		9/40 (23%)
rnf128a	NP_997780.1	PA_GRAIL_like	38..172	CDD:239037	57/139 (41%)
		zf-RING_2	256..297	CDD:290367	23/40 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	83	1.000	Domainoid score	I27761
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm31803
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22765
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X295
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.020