DRSC/TRiP Functional Genomics Resources

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Protein Alignment STX3 and Syx1A

DIOPT Version :10

Sequence 1:XP_016873680.2 Gene:STX3 / 6809 HGNCID:11438 Length:299 Species:Homo sapiens
Sequence 2:NP_001189276.1 Gene:Syx1A / 42854 FlyBaseID:FBgn0013343 Length:296 Species:Drosophila melanogaster


Alignment Length:284 Identity:163/284 - (57%)
Similarity:221/284 - (77%) Gaps:12/284 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    12 KLPLIHPMMKQLTQDDDTDAVEIAID---NTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSII 73
            :|..:|     ..|.||.:..|:|::   :.::||:||:::||.|..|||:.::|||.||.:|.|
  Fly     5 RLAALH-----AAQSDDEEETEVAVNVDGHDSYMDDFFAQVEEIRGMIDKVQDNVEEVKKKHSAI 64

Human    74 LSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEV--RSSADLRIRKSQHSVLSRK 136
            ||||..:.|||.:||.|..:|||.||.||.|||.:|::||::|.  :|||||||||:|||.||||
  Fly    65 LSAPQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADLRIRKTQHSTLSRK 129

Human   137 FVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGII-DSQISKQA 200
            ||||||:||..|.|:|||.||||||||||||:.|.|:|||:|||.||.::||.||| ::|.:||.
  Fly   130 FVEVMTEYNRTQTDYRERCKGRIQRQLEITGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAKQT 194

Human   201 LSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARDETKKAVK 265
            |::||.||:||::||:|||||||||||:|||||:||||:|.||.:|.|.:|:|:.|..:||||:|
  Fly   195 LADIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALK 259

Human   266 YQSQARKKLIIIIVLVVVLLGILA 289
            |||:||:|.|:|::.:.| |||||
  Fly   260 YQSKARRKKIMILICLTV-LGILA 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STX3XP_016873680.2 Syntaxin 44..236 CDD:459942 123/194 (63%)
SNARE 204..270 CDD:473982 44/65 (68%)
Syx1ANP_001189276.1 Syntaxin 35..230 CDD:459942 123/194 (63%)
SNARE 231..281 CDD:461727 26/50 (52%)

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