DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDKL5 and cka1

DIOPT Version :10

Sequence 1:NP_003150.1 Gene:CDKL5 / 6792 HGNCID:11411 Length:1030 Species:Homo sapiens
Sequence 2:NP_593642.1 Gene:cka1 / 2541972 PomBaseID:SPAC23C11.11 Length:332 Species:Schizosaccharomyces pombe


Alignment Length:313 Identity:91/313 - (29%)
Similarity:140/313 - (44%) Gaps:49/313 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    11 NKFEILGVVGEGAYGVVL---------KCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRT 66
            :.:||:..||.|.|..|.         ||..| ..:.|..||.|             ||:|:|:.
pombe    41 DNYEIIRKVGRGKYSEVFEGLNVLNNSKCIIK-VLKPVKYKKIK-------------REIKILQN 91

Human    67 LK-QENIVELKEAFR--RRGKLYLVFEYVE----KNMLELLEEMPNGVPPEKVKSYIYQLIKAIH 124
            |. ..||:.|.:..|  ......|:||:|:    :.:...|.:.       .::.|.|:|:||:.
pombe    92 LAGGPNIISLLDIVRDPESKTPSLIFEFVDNIDFRTLYPTLSDY-------DIRYYSYELLKALD 149

Human   125 WCHKNDIVHRDIKPENLLISHND-VLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLG-AP 187
            :||...|:|||:||.|::|.|.. .|:|.|:|.|.....|  ..|...||:|:::.||||:. ..
pombe   150 FCHSRGIMHRDVKPHNVMIDHKKRKLRLIDWGLAEFYHAG--MEYNVRVASRYFKGPELLVDFRE 212

Human   188 YGKSVDMWSVGCILGEL-SDGQPLFPGESEIDQLFTIQKVLGP------LPSEQMKLFYSNPRFH 245
            |..|:|:||.|.:...| ......|.|....|||..|.||||.      :...|:.|........
pombe   213 YDYSLDIWSFGVMFAALIFKKDTFFRGRDNYDQLVKIAKVLGTDELFAYVQKYQIVLDRQYDNIL 277

Human   246 GLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQ 298
            | ::|..:....:.|....:.|...:||:..||:.|..:|...::.:.||.||
pombe   278 G-QYPKRDWYSFVNRDNRSLANDEAIDLLNRLLRYDHQERLTCQEAMAHPYFQ 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKL5NP_003150.1 STKc_CDKL5 11..297 CDD:270838 89/310 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..349
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..566
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..834
cka1NP_593642.1 STKc_CK2_alpha 24..329 CDD:271034 89/311 (29%)
Blue background indicates that the domain is not in the aligned region.

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