DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDKL5 and pmk1

DIOPT Version :10

Sequence 1:NP_003150.1 Gene:CDKL5 / 6792 HGNCID:11411 Length:1030 Species:Homo sapiens
Sequence 2:NP_595289.1 Gene:pmk1 / 2539920 PomBaseID:SPBC119.08 Length:422 Species:Schizosaccharomyces pombe


Alignment Length:436 Identity:125/436 - (28%)
Similarity:206/436 - (47%) Gaps:82/436 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    13 FEILGVVGEGAYGVVLKCRH--KETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLK-QENI-- 72
            |:::..:|:||||:|...|:  .:..|.|||||..:......:.:..|||:|:|...: ..||  
pombe    21 FKVVKELGQGAYGIVCAARNVASKDQEAVAIKKITNVFSKSILTKRALREIKLLIHFRNHRNITC 85

Human    73 ---VELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVP--PEKVKSYIYQLIKAIHWCHKNDIV 132
               :::...: ...::|:..|.:|.::..:::   :|.|  ....:|:|||::..:.:.|..:::
pombe    86 IYDLDIINPY-NFNEVYIYEELMEADLNAIIK---SGQPLTDAHFQSFIYQILCGLKYIHSANVI 146

Human   133 HRDIKPENLLISHNDVLKLCDFGFARNLSEGNNAN---YTEYVATRWYRSPELLLG-APYGKSVD 193
            |||:||.|||::.:..||:||||.||..||....|   .||||||||||:||::|. :.|.|.:|
pombe   147 HRDLKPGNLLVNADCELKICDFGLARGCSENPEENPGFMTEYVATRWYRAPEIMLSFSSYHKGID 211

Human   194 MWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSN---------PRFHGLRF 249
            :|||||||.||..|.|||.|:..:.||..|...||....|.:....|:         |:...:.|
pombe   212 VWSVGCILAELLGGTPLFKGKDFVHQLNLILHQLGTPDEETLSHISSSRAQEYVRSLPKQRPIPF 276

Human   250 PAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHP------------------T 296
             ..|.|::         |.:.|||:..||..||..|...:..|.||                  .
pombe   277 -ETNFPKA---------NPLALDLLAKLLAFDPNRRISVDDALEHPYLAVWHDPSDEPVCDSVFD 331

Human   297 FQTQRLLDRSPSRSAKRKPYHVESSTLSNRNQAGKSTALQSHHRSNSKDIQNLSVGLPRADEGLP 361
            |..:.:.|.:..|..      :....|:.|.:..:    :||.       .|.:|.:|:..:.:|
pombe   332 FSFEYIEDANELRRV------ILDEVLNFRQKVRR----RSHP-------TNPTVNIPQPAQTVP 379

Human   362 ANESFLNG--NLAGASLSPL-----HTKTYQASSQPGSTSKDLTNN 400
            :|:   ||  |::.:|.|..     |..:|..::.....|.|..:|
pombe   380 SND---NGSFNVSSSSSSQTSNKKRHDHSYNETAAIDHKSDDNRHN 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKL5NP_003150.1 STKc_CDKL5 11..297 CDD:270838 103/324 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..349 6/48 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..566 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..834
pmk1NP_595289.1 STKc_MPK1 20..351 CDD:173750 106/349 (30%)
Blue background indicates that the domain is not in the aligned region.

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