DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDKL5 and cdkl5

DIOPT Version :10

Sequence 1:NP_003150.1 Gene:CDKL5 / 6792 HGNCID:11411 Length:1030 Species:Homo sapiens
Sequence 2:XP_031752565.1 Gene:cdkl5 / 100145195 XenbaseID:XB-GENE-951076 Length:1022 Species:Xenopus tropicalis


Alignment Length:1090 Identity:698/1090 - (64%)
Similarity:799/1090 - (73%) Gaps:140/1090 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKIPNIGNVMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLR 65
            |||||:||||||||:||||||||||||||||||||.|||||||||||||||||||||||||||||
 Frog     1 MKIPNLGNVMNKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLR 65

Human    66 TLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKND 130
            |||||||||||||||||||||||||||||||||||||||||||||||.:||||||||||||||||
 Frog    66 TLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVTNYIYQLIKAIHWCHKND 130

Human   131 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLGAPYGKSVDMW 195
            ||||||||||||||:||||||||||||||||||:||||||||||||||||||||||||||:||||
 Frog   131 IVHRDIKPENLLISYNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMW 195

Human   196 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLER 260
            ||||||||||||||||||||||||||||||||||||:||||||||||||||:|||||||||||||
 Frog   196 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGMRFPAVNHPQSLER 260

Human   261 RYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQRLLDR---SPSRSAKRKPYHVESST 322
            |||||::|||||||||||||:|:||:||||.||||.|||||||||   |||||:|||.:|.||: 
 Frog   261 RYLGIISSVLLDLMKNLLKLNPSDRFLTEQSLNHPAFQTQRLLDRGGTSPSRSSKRKTHHSESN- 324

Human   323 LSNRNQAGKSTALQSHHRSNSKDIQNLSVGLPRADEGLPANESFLNGNLAGASLSP-LHTKTYQA 386
            |::|.|:.||:::|.||||||||.|.||||..|.:|..|.||:|:||.....|.|| :|.|   .
 Frog   325 LASRKQSSKSSSVQPHHRSNSKDTQTLSVGPKRNEETHPPNETFINGAHPAGSHSPTVHQK---K 386

Human   387 SSQPGSTSKDLTNNNIPHLLSPKEAKSKTEFDFNIDPKPSEGPGTKYLKSNSRSQQNRHSFMESS 451
            :||.||.:||..:||:|||||||:||||.||||:.:.|.|:.||.||.|||||||.|||||||  
 Frog   387 NSQSGSGNKDPASNNLPHLLSPKDAKSKNEFDFSPEQKTSDVPGAKYTKSNSRSQHNRHSFME-- 449

Human   452 QSKAGTLQPNEKQSRHSYIDTIPQSS-RSPSYRTKAKSHGALSDSKSVSNLSEARAQIAEPSTSR 515
             .|.|:.||:||.:|||||||||||| :|.||...:|:||.|:|||||.||||||.||.||: ||
 Frog   450 -GKTGSWQPSEKHTRHSYIDTIPQSSKKSSSYMNYSKNHGVLTDSKSVGNLSEARGQILEPN-SR 512

Human   516 YFPSSCLDLNSPTSPTPTRHSDTRTLLSPSGRNNRNEGTLDSRRTTTRHSKTMEELKLPEHMDSS 580
            ||||||.||||||||...||.|:|.:||||||.||.||||:|||.||:||:||||||||:.||||
 Frog   513 YFPSSCHDLNSPTSPAAPRHGDSRGMLSPSGRTNRKEGTLESRRPTTKHSRTMEELKLPDQMDSS 577

Human   581 HSHSLSAPHESFSYGLGYTSPFSSQQRPHRHSMYVTRDKVRAKGLDGSLSIGQGMAARANSLQLL 645
            |||||||||||||||||||||||||||||||||||:||:||.||.|.:|::|||||:||:|||||
 Frog   578 HSHSLSAPHESFSYGLGYTSPFSSQQRPHRHSMYVSRDRVRVKGTDAALNVGQGMASRASSLQLL 642

Human   646 SPQ-----------------------PGEQLPPEMTVARSSVKETSREGTSSFHTRQKSEGGVYH 687
            |||                       .|:|:|.|:|.:|:..|:.:|:|.:|||||||:|||.||
 Frog   643 SPQVQHRTLTRSVGSSREDCTEDTTRQGDQVPSEVTHSRTLAKDPNRDGAASFHTRQKTEGGPYH 707

Human   688 DPHSDDGTAPKENRHLYNDPVPRRVGSFYRVPSPRPDNSFHENNVSTRVSSLPSESSSGTNHSKR 752
            |.|.|||.|.|||||:|:|.||||||||||||||||:.:||:|.||:|.||.|.:||..||||||
 Frog   708 DSHPDDGAASKENRHIYSDTVPRRVGSFYRVPSPRPEGTFHDNTVSSRGSSHPVDSSGVTNHSKR 772

Human   753 QPAFDPWKSPENISHSEQLKEKEKQGFFRSMKKKKKKSQT------------------------- 792
            |..||.|...|. |||||:||||||||||.:|||||||||                         
 Frog   773 QTTFDHWTGAEK-SHSEQMKEKEKQGFFRVIKKKKKKSQTTDSNDPEKPRLKKSLFPLFSSKNHL 836

Human   793 ----------------VPNSDSPDLLTLQKSIHSASTPSSRPKEWRPEKISDLQTQSQPLKSLRK 841
                            :|::|..|.|.:||.:||:|..|||.|||||:|::::.:.|||||||.|
 Frog   837 KRSSSLKKLPVVSLPMMPSADGQDHLPVQKGVHSSSHKSSRQKEWRPDKMAEIHSHSQPLKSLWK 901

Human   842 LLHLSSASNHPASSDPRFQPLTAQQTKN-SFSEIRIHPLSQASGGSSNI-RQEPAPKGRPALQLP 904
            |||.||:||||...|||||||..|..|. ||.|.||||:.|.|.....: ||:|.||.|..||:|
 Frog   902 LLHPSSSSNHPMPPDPRFQPLPNQPPKTPSFPEARIHPVGQTSSSGGVVHRQDPQPKSRQGLQIP 966

Human   905 DGGCDGRRQR-HHSGPQDRRFMLRTTEQQGEYFCCGDPKKPHTPCVPNRALHRPISSPAPYPVLQ 968
                 |:.:. .|..|                                  |:|..:..||:|   
 Frog   967 -----GQAEAVWHVSP----------------------------------LNRGTNEGAPFP--- 989

Human   969 VRGTSMCPTLQVRGTDAFSCPTQQSGFSFFVRHVMREALIHRAQVNQAAL 1018
                           |..:..|.|:|..|  ....|..|.:...:.:.||
 Frog   990 ---------------DQLASKTGQNGLPF--NRTKRTRLPNLNDLKETAL 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKL5NP_003150.1 STKc_CDKL5 11..297 CDD:270838 270/285 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..349 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..566 122/184 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..834 117/251 (47%)
cdkl5XP_031752565.1 STKc_CDKL5 11..297 CDD:270838 270/285 (95%)

Return to query results.
Submit another query.