DRSC/TRiP Functional Genomics Resources

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Protein Alignment STAU1 and stau

DIOPT Version :9

Sequence 1:NP_001309861.1 Gene:STAU1 / 6780 HGNCID:11370 Length:583 Species:Homo sapiens
Sequence 2:NP_476751.1 Gene:stau / 37065 FlyBaseID:FBgn0003520 Length:1026 Species:Drosophila melanogaster


Alignment Length:650 Identity:207/650 - (31%)
Similarity:278/650 - (42%) Gaps:186/650 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    71 ITPTVELNALCMKLGKKPMY-------KPVD--------------------PYSRMQSTYNYNMR 108
            ||||||||||.||||::..|       .|.|                    |.......|....|
  Fly   398 ITPTVELNALAMKLGQRTFYLLDPTQIPPTDSIVPPEFAGGHLLTAPGPGMPQPPPPPAYALRQR 462

Human   109 GG----------------------AYPPRYFYPFPVPPLL-------------------YQVELS 132
            .|                      .:||::...|.:||.|                   .::.|.
  Fly   463 LGNGFVPIPSQPMHPHFFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNGPFPSVPTPPSKITLF 527

Human   133 VGGQQFNGKGKTRQAAKHDAAAKALRILQNEPL---PERLEVNGRESEEENLNKSEISQVFEIAL 194
            ||.|:|.|.|:|.|.|||||||:||::|:.:.:   .|.||    :|.:|...||.||||.||.:
  Fly   528 VGKQKFVGIGRTLQQAKHDAAARALQVLKTQAISASEEALE----DSMDEGDKKSPISQVHEIGI 588

Human   195 KRNLPVNFESFPLKQVARESGPPHMKNFVTKVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLP 259
            |||:.|:|      :|.||.||.|||||:|...||..|.||||..||:|||.||..:|.||:|||
  Fly   589 KRNMTVHF------KVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLP 647

Human   260 PL-PAVERVKPRIKKKT------------------------KPIVKPQTSP------EYGQGINP 293
            || |..:....|||.||                        ||..:.:.:|      :.....||
  Fly   648 PLTPTKQTPLKRIKVKTPGKSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNP 712

Human   294 ISRLAQIQQAKKEKEPEYTLLTERG--LPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLE 356
            |::|.|:||.:|||||.:.|:.:.|  ..|||||||:|.....||.|||.:||:||||||:.:.|
  Fly   713 ITKLIQLQQTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKRNAAQALFE 777

Human   357 ILGFKVPQAQPTKPALKSEE--------------------------KTPI------------KKP 383
            :|  :..|..||.....|||                          .||:            |||
  Fly   778 LL--EAVQVTPTNETQSSEECSTSATMSAVTAPAVEATAEGKVPMVATPVGPMPGILILRQNKKP 840

Human   384 GDGR-KVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFTR 447
            ...| ::...:.....:...:|||........|:....:|     .....:.|.||.      |.
  Fly   841 AKKRDQIVIVKSNVESKEEEANKEVAVAAEENSNNSANSG-----DSSNSSSGDSQA------TE 894

Human   448 AAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPS---------------E 497
            ||...|..|.|....     .|.|..:..:..|...:.|......|..|               |
  Fly   895 AASESALNTSTGSNT-----SGVSSNSSNVGANTDGNNHAESKNNTESSSNSTSNTQSAGVHMKE 954

Human   498 QLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSEL 562
            ||.|||::..|:|.:.|:||.|.|||::::..|:.||.|.||:||..|...:.||.|.||:||:|
  Fly   955 QLLYLSKLLDFEVNFSDYPKGNHNEFLTIVTLSTHPPQICHGVGKSSEESQNDAASNALKILSKL 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAU1NP_001309861.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..55
DSRM 186..256 CDD:214634 38/69 (55%)
DSRM 292..358 CDD:238007 36/67 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 366..403 11/75 (15%)
Staufen_C 454..563 CDD:293091 39/123 (32%)
stauNP_476751.1 DSRM 312..375 CDD:214634
DSRM <529..555 CDD:294045 16/25 (64%)
DSRM 579..644 CDD:214634 38/70 (54%)
DSRM 712..780 CDD:214634 36/69 (52%)
Staufen_C <953..1020 CDD:293091 31/66 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8972
eggNOG 1 0.900 - - E1_KOG3732
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 279 1.000 Inparanoid score I2915
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D355202at33208
OrthoFinder 1 1.000 - - FOG0002435
OrthoInspector 1 1.000 - - otm41961
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46054
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4772
SonicParanoid 1 1.000 - - X1848
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.960

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