DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kirrel3 and Ama

DIOPT Version :9

Sequence 1:XP_006510620.1 Gene:Kirrel3 / 67703 MGIID:1914953 Length:803 Species:Mus musculus
Sequence 2:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster


Alignment Length:309 Identity:69/309 - (22%)
Similarity:123/309 - (39%) Gaps:52/309 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse   241 SVTID--IQHPPLVNLSVEPQPVLEDNIVTFHCSAKANPAVTQYRWAKRG------------HII 291
            ::::|  :..|.:..:|.:....:.|: |.|:|:.: ........||||.            ..|
  Fly    23 AISLDSVLSAPVISQISKDVVASVGDS-VEFNCTVE-EVGQLSVSWAKRPSESDTNSVVLSMRNI 85

Mouse   292 KEASGELYRTTVD---------YTYFSE--------PVSCEV-TNALGSTNLSRTVDVYFGPRMT 338
            .....:.|..||.         ||:..:        |..|:| .:|........::.:...|.:.
  Fly    86 LSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIA 150

Mouse   339 -SEPQSLLVDLGSDAVFSCAWIGNPSLTIVWMKRGSGVV-----LSNEKTLTLKSVRQEDAGKYV 397
             :.|:|.||..|.:...:|...|.|..||.|.:..:.|:     |..|.||.::||.:.|.|.|.
  Fly   151 ENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHRMDRGGYY 215

Mouse   398 CRAVVPRVGAGE---REVTLTVNGPPIISSTQTQHA-LHGEKGQIKCFIRSTPPPDRIAWSWKEN 458
            |   :.:.|.|:   |.:.:.|...|.|:..:.:.| :.....:::|.::..|.|..:   |.:|
  Fly   216 C---IAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAPTVV---WHKN 274

Mouse   459 VLESGTSGRYTVETVNTEEG-VISTLTISNIVRADFQTIYNCTAWNSFG 506
            .:...:|..:.|....:..| ..|.|.|.::...||...| |.|.|..|
  Fly   275 GVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYY-CNATNKLG 322

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Kirrel3XP_006510620.1 IG_like 54..143 CDD:214653
Ig strand A' 56..60 CDD:409353
Ig strand B 64..71 CDD:409353
Ig strand C 78..82 CDD:409353
Ig strand C' 84..87 CDD:409353
Ig strand D 97..101 CDD:409353
Ig strand E 104..116 CDD:409353
Ig strand G 132..143 CDD:409353
IgI_2_KIRREL3-like 149..246 CDD:409416 1/6 (17%)
Ig strand B 166..170 CDD:409416
Ig strand C 180..184 CDD:409416
Ig strand E 210..214 CDD:409416
Ig strand F 224..229 CDD:409416