DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kirrel3 and dpr4

DIOPT Version :9

Sequence 1:XP_006510620.1 Gene:Kirrel3 / 67703 MGIID:1914953 Length:803 Species:Mus musculus
Sequence 2:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster


Alignment Length:266 Identity:64/266 - (24%)
Similarity:98/266 - (36%) Gaps:51/266 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    46 QVYSFSQQPQDQVVVSGQPVTLLCAIPEY-DGFVLWIKDGLALGVGRDLSSYPQYLVVG------ 103
            |.|..:...::.....||...|.|.:... |..|.||:.       |||    ..|.||      
  Fly    44 QPYFDNSSRREVTATVGQAALLHCRVRNLGDRAVSWIRK-------RDL----HILTVGILTYTN 97

Mouse   104 --------NHLSGEHHLKILRAELQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIILGGPVISL 160
                    :..|.|..|:|...:.:|...||||.......|:..||.|:|  ....|||...:.:
  Fly    98 DQRFQSLHSEGSDEWTLRISSPQPRDSGTYECQVSTEPKISQGFRLNVVV--SRAKILGNAELFI 160

Mouse   161 RAGDPLNLTCHA-DNAKPAASIIWLRKGEVINGATYSKTLLRDG-----KRESIVSTLFISPGDV 219
            ::|..:||||.| .:..|.:.|.|.:...|:|   ||:   |.|     :|.:..|.|.|:....
  Fly   161 KSGSDINLTCLAMQSPVPPSFIYWYKGKRVMN---YSQ---RGGINVITERSTRTSKLLIAKATP 219

Mouse   220 ENGQSIVCRATNKAIPGGKETSVTIDI---QHPPLV---NLSVEPQPVLEDNIVTFHCSAKANPA 278
            .:..:..|..::     ....||.:.:   :||..:   |.|......|....|.|..:...:..
  Fly   220 ADSGNYTCSPSS-----SDSASVVVHVINGEHPAAMQHGNSSATCLRPLSSTSVPFVLATWMSMT 279

Mouse   279 VTQYRW 284
            |....|
  Fly   280 VASVAW 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kirrel3XP_006510620.1 IG_like 54..143 CDD:214653 26/103 (25%)
Ig strand A' 56..60 CDD:409353 0/3 (0%)
Ig strand B 64..71 CDD:409353 2/6 (33%)
Ig strand C 78..82 CDD:409353 2/3 (67%)
Ig strand C' 84..87 CDD:409353 0/2 (0%)
Ig strand D 97..101 CDD:409353 0/3 (0%)
Ig strand E 104..116 CDD:409353 4/11 (36%)
Ig strand G 132..143 CDD:409353 3/10 (30%)
IgI_2_KIRREL3-like 149..246 CDD:409416 25/102 (25%)
Ig strand B 166..170 CDD:409416 2/3 (67%)
Ig strand C 180..184 CDD:409416 1/3 (33%)
Ig strand E 210..214 CDD:409416 2/3 (67%)
Ig strand F 224..229 CDD:409416 1/4 (25%)
Ig strand G 239..242 CDD:409416 0/2 (0%)
Ig <267..334 CDD:416386 4/18 (22%)
Ig strand B 267..274 CDD:409353 2/6 (33%)
Ig strand C 279..286 CDD:409353 2/6 (33%)
Ig strand C' 288..291 CDD:409353
Ig strand D 298..302 CDD:409353
Ig strand E 304..310 CDD:409353
Ig strand G 321..334 CDD:409353
Ig 335..416 CDD:416386
Ig strand A' 343..347 CDD:409353
Ig strand B 350..360 CDD:409353
Ig strand C 365..371 CDD:409353
Ig strand E 381..387 CDD:409353
IgI_5_KIRREL3 418..515 CDD:409479
Ig strand B 436..440 CDD:409479
Ig strand C 450..454 CDD:409479
Ig strand E 481..485 CDD:409479
Ig strand F 496..501 CDD:409479
Ig strand G 509..512 CDD:409479
dpr4NP_001014616.2 V-set 53..146 CDD:284989 26/103 (25%)
IG_like 53..145 CDD:214653 26/102 (25%)
ig 153..227 CDD:278476 21/79 (27%)
IG_like 161..>227 CDD:214653 19/71 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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