Sequence 1: | NP_001028307.2 | Gene: | Rnf149 / 67702 | MGIID: | 2677438 | Length: | 394 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497129.1 | Gene: | H10E21.5 / 175169 | WormBaseID: | WBGene00019185 | Length: | 473 | Species: | Caenorhabditis elegans |
Alignment Length: | 311 | Identity: | 94/311 - (30%) |
---|---|---|---|
Similarity: | 143/311 - (45%) | Gaps: | 76/311 - (24%) |
- Green bases have known domain annotations that are detailed below.
Mouse 82 PAPAEGCAPDTRFVAPGALGNAPWVALVARGGCTFKDKVLAAARRNASAVVVYNLESNGNATEPM 146
Mouse 147 SHAGTGNIVVIMISYPKGREIFDLVQKGIPVKMRIEIG------------------TRHMQEFIS 193
Mouse 194 GQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQFGSQNHRKE---------TKKVIGQLPLH 249
Mouse 250 TVKHG-EKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKAL 313
Mouse 314 GYWGDPEDTQELPTPEAAPGRVSVGNLSVTSQDEERSESNL--PSSSSSES 362 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rnf149 | NP_001028307.2 | PA_GRAIL_like | 45..181 | CDD:239037 | 18/98 (18%) |
UPF0233 | <193..>220 | CDD:299753 | 17/26 (65%) | ||
zf-RING_2 | 263..306 | CDD:290367 | 28/42 (67%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 321..394 | 7/44 (16%) | |||
H10E21.5 | NP_497129.1 | HRD1 | <150..325 | CDD:227568 | 72/186 (39%) |
RING-H2_GRAIL | 226..273 | CDD:319582 | 32/49 (65%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I5750 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | otm16989 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.970 |