DRSC/TRiP Functional Genomics Resources

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Protein Alignment SSTR4 and AstC-R1

DIOPT Version :9

Sequence 1:NP_001043.2 Gene:SSTR4 / 6754 HGNCID:11333 Length:388 Species:Homo sapiens
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:386 Identity:132/386 - (34%)
Similarity:211/386 - (54%) Gaps:41/386 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSAPSTLPPGGEEGL-GTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLVGLVG 64
            :|..||:.|  ||.| ||..|:          .:..:|....  .|.:..: .:|..||::||.|
  Fly    45 ISGSSTIQP--EESLYGTDLPT----------YQHCIATRNS--FADLFTV-VLYGFVCIIGLFG 94

Human    65 NALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCRAVLSVDGLN 129
            |.|||:|:||::||:|.||||:||||||||.|::.:||:..:..:..|.||..:|:|.:....:.
  Fly    95 NTLVIYVVLRFSKMQTVTNIYILNLAVADECFLIGIPFLLYTMRICSWRFGEFMCKAYMVSTSIT 159

Human   130 MFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLPIAIFADTRPARGGQ 194
            .|||...|.::|.|||:||.||:.:..||...:||:::...|..|.::.||:.::|.|.....|.
  Fly   160 SFTSSIFLLIMSADRYIAVCHPISSPRYRTLHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDGI 224

Human   195 AVACNLQWP-----HPAWSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKMRAVALRAGW--QQRRR 252
            ..:||:.||     |.  ...|::|||.|||..|:..|...|.|::.|:|:|..:.|.  :::||
  Fly   225 NYSCNIMWPDAYKKHS--GTTFILYTFFLGFATPLCFILSFYYLVIRKLRSVGPKPGTKSKEKRR 287

Human   253 SEKKITRLVLMVVVVFVLCWMPFYVVQLLNLFVTSLDATVNHVSLI-------LSYANSCANPIL 310
            :.:|:|||||.|:.|::|||:|.::.|:..:........::.:.::       |.|:||..||||
  Fly   288 AHRKVTRLVLTVISVYILCWLPHWISQVALIHSNPAQRDLSRLEILIFLLLGALVYSNSAVNPIL 352

Human   311 YGFLSDNFRR-FFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSKGG------AGCMCPPL 364
            |.|||:|||: ||:...|:....:...  .:.||..:.....|.:||      :....|||
  Fly   353 YAFLSENFRKSFFKAFTCMNKQDINAQ--LQLEPSVFTKQGSKKRGGSKRLLTSNPQIPPL 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SSTR4NP_001043.2 7tmA_SSTR4 48..322 CDD:320639 109/288 (38%)
TM helix 1 49..75 CDD:320639 12/25 (48%)
TM helix 2 82..108 CDD:320639 15/25 (60%)
TM helix 3 119..149 CDD:320639 11/29 (38%)
TM helix 4 161..183 CDD:320639 6/21 (29%)
TM helix 5 208..237 CDD:320639 11/28 (39%)
TM helix 6 252..282 CDD:320639 14/29 (48%)
TM helix 7 290..315 CDD:320639 10/31 (32%)
AstC-R1NP_649040.2 7tm_4 88..368 CDD:304433 109/281 (39%)
7tm_1 94..353 CDD:278431 96/260 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 223 1.000 Domainoid score I2578
eggNOG 1 0.900 - - E33208_3BCR0
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I3312
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000463
OrthoInspector 1 1.000 - - mtm8609
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3938
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.990

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