DRSC/TRiP Functional Genomics Resources

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Protein Alignment SSTR2 and sstr2b

DIOPT Version :10

Sequence 1:NP_001041.1 Gene:SSTR2 / 6752 HGNCID:11331 Length:369 Species:Homo sapiens
Sequence 2:XP_017210358.2 Gene:sstr2b / 560530 ZFINID:ZDB-GENE-130530-727 Length:373 Species:Danio rerio


Alignment Length:350 Identity:229/350 - (65%)
Similarity:281/350 - (80%) Gaps:4/350 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    21 LNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCGNTLVIYVILRYAKMKTITNIYILNL 85
            ||.|...|. ||:.|.:...|:.||:|.:||:||::|||||.||||||||||||||:||||||||
Zfish    27 LNISEEETQ-SNEPEQHLTNTNTAVVTVMYFLVCVVGLCGNALVIYVILRYAKMKTVTNIYILNL 90

Human    86 AIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKS 150
            |:||.||||.|||:|:|:|:||||||..:|.||:|:|.:|||||||||.|||||||||||||:||
Zfish    91 AVADILFMLSLPFIAIQLAMVHWPFGATMCHVVITIDSLNQFTSIFCLMVMSIDRYLAVVHPMKS 155

Human   151 AKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLRSNQWGRSSCTINWPGESGAWYTGFIIYTFIL 215
            .|||:|:.||...:|||.||||||||::.|:||.:...| ..|:|.||...||:.|.|:||||:|
Zfish   156 IKWRKPQVAKATNVAVWVVSLLVILPVVFYSGLITKAEG-CFCSIVWPDPQGAYQTAFMIYTFLL 219

Human   216 GFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFYIFNVSSV 280
            ||.:||.:||||||.||||||||||:|.||||:.|||||||:||:||.||:||||||||||::||
Zfish   220 GFFLPLMVICLCYLLIIIKVKSSGIKVSSSKRRYSEKKVTRLVSVVVLVFVFCWLPFYIFNMTSV 284

Human   281 SMAISPTPALKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQ 345
            :..||.||.|:.:|.|||||.|||||||||||||||:||:||||||||. |.....|..||:|:.
Zfish   285 TGTISDTPFLRSVFAFVVVLGYANSCANPILYAFLSENFRKSFQNVLCF-KKEALSDAARSNSRL 348

Human   346 DKSR-LNETTETQRTLLNGDLQTSI 369
            |:.: ||:..|||.|::|||||||:
Zfish   349 DRPQILNDPMETQHTVINGDLQTSL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SSTR2NP_001041.1 7tmA_SSTR2 44..323 CDD:320637 195/278 (70%)
TM helix 1 45..71 CDD:320637 18/25 (72%)
TM helix 2 78..104 CDD:320637 20/25 (80%)
TM helix 3 115..145 CDD:320637 23/29 (79%)
TM helix 4 157..179 CDD:320637 13/21 (62%)
TM helix 5 205..234 CDD:320637 19/28 (68%)
TM helix 6 249..279 CDD:320637 23/29 (79%)
TM helix 7 291..316 CDD:320637 19/24 (79%)
sstr2bXP_017210358.2 None

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