DRSC/TRiP Functional Genomics Resources

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Protein Alignment SSTR2 and Sstr2

DIOPT Version :10

Sequence 1:NP_001041.1 Gene:SSTR2 / 6752 HGNCID:11331 Length:369 Species:Homo sapiens
Sequence 2:NP_062221.1 Gene:Sstr2 / 54305 RGDID:3763 Length:369 Species:Rattus norvegicus


Alignment Length:369 Identity:343/369 - (92%)
Similarity:355/369 - (96%) Gaps:0/369 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDMADEPLNGSHTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCGNTLVI 65
            |::..|..|||..|:..|||||||:..:|.|||||||||:||||||||||||||::|||||||||
  Rat     1 MELTSEQFNGSQVWIPSPFDLNGSLGPSNGSNQTEPYYDMTSNAVLTFIYFVVCVVGLCGNTLVI 65

Human    66 YVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSI 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 YVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSI 130

Human   131 FCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLRSNQWGRSSCTI 195
            ||||||||||||||||||||||||||||||||.:|||||||||||||||||||||||||||||||
  Rat   131 FCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMINVAVWGVSLLVILPIMIYAGLRSNQWGRSSCTI 195

Human   196 NWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSI 260
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 NWPGESGAWYTGFIIYAFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSI 260

Human   261 VVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQN 325
            |||||||||||||||||||||:||||||||||||||||:||||||||||||||||||||||||||
  Rat   261 VVAVFIFCWLPFYIFNVSSVSVAISPTPALKGMFDFVVILTYANSCANPILYAFLSDNFKKSFQN 325

Human   326 VLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI 369
            |||||||||.:|||||||||||||||||||||||||||||||||
  Rat   326 VLCLVKVSGAEDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SSTR2NP_001041.1 7tmA_SSTR2 44..323 CDD:320637 271/278 (97%)
TM helix 1 45..71 CDD:320637 23/25 (92%)
TM helix 2 78..104 CDD:320637 25/25 (100%)
TM helix 3 115..145 CDD:320637 29/29 (100%)
TM helix 4 157..179 CDD:320637 19/21 (90%)
TM helix 5 205..234 CDD:320637 27/28 (96%)
TM helix 6 249..279 CDD:320637 29/29 (100%)
TM helix 7 291..316 CDD:320637 23/24 (96%)
Sstr2NP_062221.1 7tmA_SSTR2 44..323 CDD:320637 271/278 (97%)
TM helix 1 45..71 CDD:320637 23/25 (92%)
TM helix 2 78..104 CDD:320637 25/25 (100%)
TM helix 3 115..145 CDD:320637 29/29 (100%)
TM helix 4 157..179 CDD:320637 19/21 (90%)
TM helix 5 205..234 CDD:320637 27/28 (96%)
TM helix 6 249..279 CDD:320637 29/29 (100%)
TM helix 7 291..316 CDD:320637 23/24 (96%)

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