DRSC/TRiP Functional Genomics Resources

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Protein Alignment SSTR2 and map3

DIOPT Version :10

Sequence 1:NP_001041.1 Gene:SSTR2 / 6752 HGNCID:11331 Length:369 Species:Homo sapiens
Sequence 2:NP_001342813.1 Gene:map3 / 2542271 PomBaseID:SPAC3F10.10C Length:365 Species:Schizosaccharomyces pombe


Alignment Length:376 Identity:83/376 - (22%)
Similarity:138/376 - (36%) Gaps:108/376 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    48 FIYFVVCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHW--PF 110
            :.||          .||:.:.:.|.:::. .||..|.|     ||.|.|..|...|....|  |:
pombe    11 YAYF----------ALVLSIPILYMQLRA-RNIPCLLL-----LFWLTLTTLIYVVESAIWSNPY 59

Human   111 -------GKAICRV---VMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKS-AKWRRPRTAKMITM 164
                   |..:|.:   ::|...|....|.|.| |:.:|..:...||:|. ..|           
pombe    60 AETIRWMGYGLCDITSRIVTCSSIGIPASAFTL-VLYLDTVIRRDHPLKRYENW----------- 112

Human   165 AVWGVSLLVILPIMIYA---GLRSNQW---GRSSCTINWPGESGAWYTGFIIYTFILGFLVPLTI 223
             :|.|.|.::||::|.|   .|.||::   ..:.|   :......|||       :|.|.:|..:
pombe   113 -IWHVCLSILLPLIIMAMMVPLESNRYVVICMNGC---YSSFYQTWYT-------LLFFYIPPCL 166

Human   224 ICLCYLFIIIKVKSSGIRVGSSKRKK------------SEKKVTRMVSIVVAVFIFCWLPFYIFN 276
            :....||.:     |.|.|...:|::            :.|:..|::.: .|||...:.|..||.
pombe   167 LSFGGLFFV-----SRIVVLYWRRQRELQQFFQRDSQLTSKRFLRLLCL-AAVFFLGYFPLTIFM 225

Human   277 V--------------------SSVSMAISPTPALKGMFDFV-VVLTYANSCANPILYAFLSDNFK 320
            |                    ...|:...||..: |:.|:| ..:.|..|     |:...|..:.
pombe   226 VVANGKLQQFLPFNHELVEAWHQESITYYPTTKV-GLNDWVPPTVLYLMS-----LFFSTSGGWT 284

Human   321 KSFQNVLCLVKV-----SGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQ 366
            :....:|..:.|     ..|..|..:..|.|..:..|:|...:||.:.|.:
pombe   285 EKVALILWSLLVWLPFTKNTALGRHAQFKLDCCKSIESTMAGKTLDSTDFK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SSTR2NP_001041.1 7tmA_SSTR2 44..323 CDD:320637 72/326 (22%)
TM helix 1 45..71 CDD:320637 4/22 (18%)
TM helix 2 78..104 CDD:320637 9/25 (36%)
TM helix 3 115..145 CDD:320637 8/32 (25%)
TM helix 4 157..179 CDD:320637 5/21 (24%)
TM helix 5 205..234 CDD:320637 7/28 (25%)
TM helix 6 249..279 CDD:320637 9/61 (15%)
TM helix 7 291..316 CDD:320637 6/25 (24%)
map3NP_001342813.1 STE3 10..280 CDD:460437 71/319 (22%)

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