DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BRAF and braf

DIOPT Version :9

Sequence 1:NP_001361187.1 Gene:BRAF / 673 HGNCID:1097 Length:807 Species:Homo sapiens
Sequence 2:XP_031754388.1 Gene:braf / 779570 XenbaseID:XB-GENE-1014202 Length:963 Species:Xenopus tropicalis


Alignment Length:803 Identity:697/803 - (86%)
Similarity:723/803 - (90%) Gaps:12/803 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAALSGGGGGGAEPGQALFNGD-MEPEAGAGAGAAASSAADPAIPEEVWNIKQMIKLTQEHIEAL 64
            |||:|    ||:..|.:|.||| :|.|.| |.|.|....|....|||||||||||||||||||||
 Frog    12 MAAVS----GGSTEGPSLLNGDLLESETG-GLGGAGEMCASGGYPEEVWNIKQMIKLTQEHIEAL 71

Human    65 LDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVSSSASMDTVTSSSSSSLS 129
            ||||||||||||||:|||||||||||.|||||||||||:|||||   |:|...:...||..|:||
 Frog    72 LDKFGGEHNPPSIYVEAYEEYTSKLDLLQQREQQLLESMGNGTD---STSLPSELTLSSVPSNLS 133

Human   130 VLPSSLSVFQNPTDVARSNPKSPQKPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPEC 194
            :.||:||..:.|:|.:|.|||||||||||||||||||||||||.|||||||||||||||||||||
 Frog   134 LAPSALSALRTPSDPSRINPKSPQKPIVRVFLPNKQRTVVPARSGVTVRDSLKKALMMRGLIPEC 198

Human   195 CAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGF 259
            |||||:||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
 Frog   199 CAVYRVQDGEKKPIGWDTDISWITGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGF 263

Human   260 RCQTCGYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETALTSGSSPSAPASD 324
            |||||||||||||||||||||||||:|||||||||||||||.||||...|.|..:.||...|..|
 Frog   264 RCQTCGYKFHQRCSTEVPLMCVNYDRLDLLFVSKFFEHHPISQEEAPFEEVAPAAESSTPPPPPD 328

Human   325 SIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVHINTIEPVNIDDLIRDQGFR 389
            :.||..|.|.|||||||||||||| ||||||||||||||||||||||||||||||||||||||.:
 Frog   329 ATGPLCLPSTSPSKSIPIPQPFRP-DEDHRNQFGQRDRSSSAPNVHINTIEPVNIDDLIRDQGLQ 392

Human   390 -GDGAPLNQLMRCLRKYQSRTPSPLLHSVPSEIVFDFEPGPVFRGSTTGLSATPPASLPGSLTNV 453
             .:|||..|..||.|||.||.||||||::|||||||||..||.||||.|||||||||||||||||
 Frog   393 CSEGAPSVQPTRCHRKYHSRDPSPLLHTLPSEIVFDFESDPVCRGSTPGLSATPPASLPGSLTNV 457

Human   454 KALQKSPGPQRERKSSSSS-EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWH 517
            ||||||||.|||||||||| |||:|||||||||||||||||||||||||||||||||||||||||
 Frog   458 KALQKSPGQQRERKSSSSSTEDRSRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWH 522

Human   518 GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH 582
            ||||||||||||||||||||||||||||||||||||||||||||||||.:|||||||||||||||
 Frog   523 GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLRLVTQWCEGSSLYHHLH 587

Human   583 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 647
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   588 IIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 652

Human   648 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 712
            ||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
 Frog   653 HQFEQLSGSILWMAPEVIRMQDNNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 717

Human   713 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAG 777
            |||||.||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
 Frog   718 YLSPDFSKVRSNCPKAMKRLMADCLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAG 782

Human   778 FQTEDFSLYACASPKTPIQAGGY 800
            |||||||||.|||||||||||||
 Frog   783 FQTEDFSLYTCASPKTPIQAGGY 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BRAFNP_001361187.1 RBD_BRAF 154..232 CDD:340654 74/77 (96%)
C1_B-Raf 230..289 CDD:410421 57/58 (98%)
STKc_Raf 503..755 CDD:270964 246/251 (98%)
brafXP_031754388.1 RBD_BRAF 158..236 CDD:340654 74/77 (96%)
C1 234..293 CDD:412127 57/58 (98%)
STKc_Raf 508..760 CDD:270964 246/251 (98%)
DERM 815..962 CDD:405404
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 511 1.000 Domainoid score I3557
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3197
Inparanoid 1 1.050 1305 1.000 Inparanoid score I1902
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG49873
OrthoDB 1 1.010 - - D106150at7742
OrthoFinder 1 1.000 - - FOG0001587
OrthoInspector 1 1.000 - - oto151932
Panther 1 1.100 - - LDO PTHR44329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X994
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.080

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