DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SRMS and Src64B

DIOPT Version :9

Sequence 1:NP_543013.1 Gene:SRMS / 6725 HGNCID:11298 Length:488 Species:Homo sapiens
Sequence 2:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster


Alignment Length:479 Identity:196/479 - (40%)
Similarity:276/479 - (57%) Gaps:36/479 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    25 EPDH------GTPGSLD---PNTDPVPTLPAEPCSPFPQLFLALYDFTARCGGELSVRRGDRLCA 80
            :|:|      |..|.:|   |.|.|.    ..|.....::.:||||:.:|...:||..:|||:..
  Fly    64 DPNHRGPLKIGGKGGVDIIRPRTTPT----GVPGVVLKRVVVALYDYKSRDESDLSFMKGDRMEV 124

Human    81 LE--EGGGYIFARRLSGQPSAGLVPITHVAKASPETLSDQPWYFSGVSRTQAQQLLLSPPNEPGA 143
            ::  |...:......:.|  .||:|:..||:  ..:::.:.|:|..|.|.:|.:|||:..|..|.
  Fly   125 IDDTESDWWRVVNLTTRQ--EGLIPLNFVAE--ERSVNSEDWFFENVLRKEADKLLLAEENPRGT 185

Human   144 FLIRPSESSLGGYSLSVR-----AQAKVCHYRVSMAADGSLYLQKGRLFPGLEEL-LTYYKANWK 202
            ||:||||.:..||||||:     ....|.|||:....:|..|:...:.||.|:.| :.|.|.|..
  Fly   186 FLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNGGYYIATNQTFPSLQALVMAYSKENAL 250

Human   203 LIQNPLLQPCMPQKAPR--------QDVWERPHSEFALGRKLGEGYFGEVWEGLWLGSLPVAIKV 259
            .:.:.|.:|| |:..|:        :|.:|.|.||..|.||||.|.||||:.|.|..|:.||:|.
  Fly   251 GLCHILSRPC-PKPQPQMWDLGPELRDKYEIPRSEIQLLRKLGRGNFGEVFYGKWRNSIDVAVKT 314

Human   260 IKSANMKLTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTELMRKGNLQAFLGTPEGRALRL 324
            ::...|......:|...:|..||.||:.|:||||..||:|||.|.|.||:|..||...:||.|..
  Fly   315 LREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDGRYLHF 379

Human   325 PPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLVDDGLACKVADFGLARLLKDDIYSPSSSSKIP 389
            ..|:..|.|||.||.|||.::::||||||||||:.:....|:.||||||::.||.|.|...|:.|
  Fly   380 EDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFP 444

Human   390 VKWTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETLQQIMRGYRLPRPA--ACP 452
            ||||||||..|..||.||||||:|:||.|:|||||.||.||.:.|.::.|.||:|:|:|.  ..|
  Fly   445 VKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFP 509

Human   453 AEVYVLMLECWRSSPEERPSFATL 476
            ..:|.|:|:||.:.||:||:|..|
  Fly   510 DNIYQLLLQCWDAVPEKRPTFEFL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRMSNP_543013.1 SH3_Srms 55..109 CDD:212780 16/55 (29%)
SH2 119..197 CDD:301589 32/83 (39%)
PTKc_Srm_Brk 223..483 CDD:133248 129/256 (50%)
STYKc 232..480 CDD:214568 125/247 (51%)
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 15/52 (29%)
SH2_Src_family 158..259 CDD:199827 36/100 (36%)
STYKc 285..537 CDD:214568 125/249 (50%)
PTKc_Src_like 289..538 CDD:270630 124/245 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.820

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