| Sequence 1: | NP_004590.2 | Gene: | SREBF2 / 6721 | HGNCID: | 11290 | Length: | 1141 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_595694.1 | Gene: | sre1 / 2540730 | PomBaseID: | SPBC19C2.09 | Length: | 900 | Species: | Schizosaccharomyces pombe |
| Alignment Length: | 1031 | Identity: | 202/1031 - (19%) |
|---|---|---|---|
| Similarity: | 333/1031 - (32%) | Gaps: | 388/1031 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Human 94 QVTLPSFSPSAASP--QAPTLQV--KVSPTSVPTTPRATPILQPRPQPQPQPQTQ---------- 144
Human 145 --LQQQTVMITPTFSTTPQTRIIQ----------QPLIYQNAATSFQVLQPQVQSLVTSSQV--- 194
Human 195 ---------------QPVTIQQQVQT------------VQAQRVLTQTANGTLQTLAPATVQTVA 232
Human 233 APQVQQVPVLVQPQI-IKTDSLVL---TTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVG 293
Human 294 SSGTILTTMPVMMGQEKVPIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVM 358
Human 359 GTDA----------------------KMHKSGVLRKAIDYIKYLQQVNHKLRQENMVL--KLANQ 399
Human 400 KNKLLKGIDLGSLVDNEVDLKIEDFNQNVLLMSPPASD-----SGSQAGFSPYSI--DSEPG--- 454
Human 455 ----SPLLDDAKVKDEPDSPPVALGMV-----DRSRI---LLCVLTFLCLSF--NPLTSLLQWGG 505
Human 506 A--------HDSDQHP-HSGSGRSVLSFESGSGGWFDWMMPTLLLW----------LVNGVIVLS 551
Human 552 VFVKLLVHGEPVIRPHSRSSVTFWRHR-------------------------KQADLDLARGD-- 589
Human 590 ---------FAAAAG---NLQTC--------LAVLGRALPTSRLDLACSLSWNVIRYSLQKLRLV 634
Human 635 RWLLKKVFQCRRATPATEAGFEDEAKTSARDAALAYHRLHQL-HITGKLPAGSACSDV---HMAL 695
Human 696 CAVNLAECAEEKIPPSTLVEIHLTAAMGLKTRCGGKLGFLASYF------------LSRAQ---- 744
Human 745 -----SLCGPEHSAVPDSLRWLCHPLGQKFFMERSWSVKSAAKESLYCAQRNPADPIAQVHQAFC 804
Human 805 KNLLERAIESLVKPQAKKKAGDQEEESCEFSSALEYLKLLHSFVDSVGVMSPPLSRSSVLKSALG 869
Human 870 -PDIICRWW-----------TSAITVAISWLQGDDAAVRSHFTKVERIPKALEVTE 913 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SREBF2 | NP_004590.2 | Transcriptional activation (acidic). /evidence=ECO:0000269|PubMed:35120642 | 1..50 | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 48..144 | 17/53 (32%) | |||
| Interaction with LMNA. /evidence=ECO:0000250|UniProtKB:Q3U1N2 | 237..491 | 69/303 (23%) | |||
| bHLHzip_SREBP2 | 326..402 | CDD:381492 | 33/99 (33%) | ||
| Leucine-zipper | 380..401 | 7/22 (32%) | |||
| sre1 | NP_595694.1 | bHLHzip_scHMS1_like | 259..354 | CDD:381405 | 33/98 (34%) |
| DUF2014 | 516..766 | CDD:430604 | 54/321 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||