DRSC/TRiP Functional Genomics Resources

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Protein Alignment SREBF1 and sre1

DIOPT Version :10

Sequence 1:NP_001005291.1 Gene:SREBF1 / 6720 HGNCID:11289 Length:1177 Species:Homo sapiens
Sequence 2:NP_595694.1 Gene:sre1 / 2540730 PomBaseID:SPBC19C2.09 Length:900 Species:Schizosaccharomyces pombe


Alignment Length:958 Identity:219/958 - (22%)
Similarity:324/958 - (33%) Gaps:355/958 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    92 ASPDTSSPGSLS--PPPATLSSSLEAFLSGP-----------QAAPSPLSPPQPAPTPLKMYPSM 143
            ||||:.||.|:.  |..:.|:||.:|..|.|           .|:....|||....|.|      
pombe    23 ASPDSKSPNSVGAIPSSSPLASSTKASTSTPFVENCSNLLCDLASIVEDSPPTLTNTSL------ 81

Human   144 PAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFP---APAPPQFSSTPVLGYPSP------P 199
               ||      .|..||.:::    .:...|.|.:|.   ..|||.|:||. :|.|:.      |
pombe    82 ---SP------HSFSLSDMES----SMSNWLNPFAFDNTMNSAPPLFTSTN-MGSPNSLENSTNP 132

Human   200 GGFSTGSPPGNTQQPLPGLPLASPPGVPPVSLHTQVQSVVPQQLLTVTAAPTAAPVTTTVTSQIQ 264
            ...:.|||.....:...|      |.:.......::|    :|:..:.:..|..|      |.:|
pombe   133 LLSNCGSPNSFQNETFTG------PSLNEFDADDKIQ----RQMKILHSVDTIDP------STVQ 181

Human   265 QVPV--LLQPHFIKADSLLLTAMKTDGATVKAAGLSPLVSGTTVQTGPLPTLVSGGTILATVPLV 327
            ..|.  :..|........::|.|.|   |.|     |..|...::..|      ......::|  
pombe   182 NYPSADMSNPEVKLKTEEIITPMDT---TCK-----PEPSAKKIKLSP------SSEDSCSIP-- 230

Human   328 VDAEKLPINR-LAAGSKAPAS-----AQSRGE-KRTAHNAIEKRYRSSINDKIIELKDLVVGTEA 385
               |.||.:. .:.||.:|:.     |...|: |:||||.||||||:::||:|.||:|.|....|
pombe   231 ---ETLPFSAPKSRGSLSPSETPDFVAGPGGKPKKTAHNMIEKRYRTNLNDRICELRDAVPSLRA 292

Human   386 ----------------------KLNKSAVLRKAIDYIRFLQHSNQKLKQEN--LSLRTAVHKSKS 426
                                  ||||..:|.||.:|||.|:..|::|::.|  ||.|.|.::..|
pombe   293 AAALRCGNSLDDEDLGGLTPARKLNKGTILAKATEYIRHLEAKNKELQKTNKQLSDRLAFYEDPS 357

Human   427 LKDLVSACGSGGNTDVLMEGVKTEVEDTLTPPPSDAGSPFQSSPLSLGSRGSGSGGSGSDSEPDS 491
                                        :.||.:|             :|...|....|.|  |.
pombe   358 ----------------------------MAPPSND-------------TRAVNSVNVVSSS--DY 379

Human   492 PVFEDSKAKPEQR----PSLHSRGMLDRSRLALCTLVFLCLSCNPLASLLGARGLPSPSDTTSVY 552
            .|.:.|:....||    |:|::.|     |.||..:|.|.|.                       
pombe   380 SVHQSSRPNLTQRAFTSPTLNTMG-----RTALNGMVGLGLF----------------------- 416

Human   553 HSPGRNVLGTESRDGPGWAQWLLPPVVW-------LLNGLLVLVSLVLLFVY-----------GE 599
                 |..|.:|.... :..:.|||.:.       |.|.|.:.|.|:.||..           ||
pombe   417 -----NYFGNDSSQSV-YGLFALPPFLMSPFTGTVLFNMLKIGVVLLGLFYLLHDNSLFKGFKGE 475

Human   600 P----VTRPHSGPAVYFWR---HRKQADLDLARGDFAQAAQQLWLALRALGRPLPTSHLDLACSL 657
            .    .||....|:...:|   ..|...||                           |.....||
pombe   476 KKSKVSTRSSMSPSSILFRKTVFEKYCLLD---------------------------HSTSTISL 513

Human   658 LWNLIRHLLQRLWVGRWLAGRAGGLQQDCALRVDASASARDAALVYHKLHQLHTMGKHTGGHLTA 722
            .:.|:...|:..:                             ..:.|:|..|:|         ::
pombe   514 FFGLLIFTLKSAY-----------------------------GYLTHRLSALYT---------SS 540

Human   723 TNLALSALNLAE------------CAGDAVSVATLAEIYVAAALRVKTSLPRALHFLTRFFLSSA 775
            .|...|...|||            ..||| .|..|..:.|.|:   ..|||.:.|       :.|
pombe   541 ENWVYSEQQLAEVRNMEKLLDAQLMGGDA-KVDRLRLLMVFAS---SFSLPPSSH-------TCA 594

Human   776 RQACLAQ----SGSVPPAMQWLCHPVGHRFFVDGDWSVLSTPWESLYSLAGNPVDPLAQVTQLFR 836
            .||...|    :.|||.|:...|    ..||    |:            |.......:.|....|
pombe   595 LQAMYCQLIFSNTSVPSAIVSKC----VAFF----WN------------AAKKQHSKSSVHAELR 639

Human   837 EHLLERALNCVTQPNPSPGSADGDKEFS-DALGYLQLLNSCS-DAAGAPAYSFSISSSMATTTGV 899
            | |.|...|.:.       ::..|..|| :.:..|.:|..|: |:|   ..|.||.||::....:
pombe   640 E-LPECTANLIE-------NSHADDVFSPNMVERLWVLAKCTRDSA---QMSDSIISSLSDVLVL 693

Human   900 DP---VAKWWAS--LTAVVIHWLRRDEEAAE-----RLCP----LVEH 933
            .|   :|.|:|:  |.|:::..|.|..|.:|     .|||    ::.|
pombe   694 SPLEVLASWYAADLLDALLMESLSRKVEISEIEEIISLCPKNSSIIRH 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SREBF1NP_001005291.1 Herpes_BLLF1 <79..350 CDD:282904 66/287 (23%)
Atrophin-1 <117..>240 CDD:460830 31/142 (22%)
bHLHzip_SREBP1 349..423 CDD:381491 38/98 (39%)
sre1NP_595694.1 bHLHzip_scHMS1_like 259..354 CDD:381405 37/94 (39%)
DUF2014 516..766 CDD:430604 68/306 (22%)

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