Sequence 1: | NP_009231.2 | Gene: | BRCA1 / 672 | HGNCID: | 1100 | Length: | 1884 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012807962.2 | Gene: | brca1 / 733513 | XenbaseID: | XB-GENE-490624 | Length: | 1655 | Species: | Xenopus tropicalis |
Alignment Length: | 2046 | Identity: | 542/2046 - (26%) |
---|---|---|---|
Similarity: | 818/2046 - (39%) | Gaps: | 621/2046 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MDLSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPS-QCPLC 64
Human 65 KNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENN--------SPEHLKDE 121
Human 122 VSIIQSMGYRNRAKRLLQSE--PENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGS 184
Human 185 DSS---------------------EDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEF 228
Human 229 SETDVTNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLT 293
Human 294 KDRMNVEKAEFCNKSKQPGLARSQHNRWAGSKETC-NDRRTPSTEKKVD---------------- 341
Human 342 --LNADPLCERKEWNKQKLPCSENPRDTEDVPWITLNSSIQKVNEWFSRSDE----LLGSDD--- 397
Human 398 ----------SHDGESESNAKVADVLDVLNEVDEYSGSSEKIDLLASDPHEALICKSERVHSKSV 452
Human 453 ESNIEDKIFGKTY-RKKASLP--NLSHVTENLIIGAFVTEPQIIQERPLTNKLKR------KRRP 508
Human 509 TSGLHPE--------------DFIKKADLAVQKTPEMINQ--GTNQTEQNGQVMNITNSGHENKT 557
Human 558 KGDSIQNEKNPNPIESLEKESAFKTKAE--------PISSSISNMELELNIHNSKAPKKNRLRRK 614
Human 615 SSTRHIHALELVVSRNLSPPNCTELQIDSCSSSEEIKKKKYNQMPVRHSRNLQLMEGKEPATGAK 679
Human 680 KSNKPNEQTSKRHDSDTFPELKLTNAPGSFTKCSNTSELKEFVNPS-LPREEKEEKLETVKVSNN 743
Human 744 AEDPKDLMLSGERVLQTERSVESSSISLVPGTDYGTQESISLLEVSTLGKAKTEPNK-------C 801
Human 802 VSQCAAFENPKGLIHGCSKDNRNDTEGFKYPLGHEVNHSRETSIEMEESELDAQYLQNTFKVSKR 866
Human 867 QSFAPFSNPGNAEEECATFS----------------AHSGSLKKQSPKVTFECEQKEENQGKNES 915
Human 916 NIKPVQTVNITAGFPVVGQKDKPVDNAKCSIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRI 980
Human 981 PPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKEASSSNIN 1045
Human 1046 EVGSSTNEVGSSINEIGSSDENIQAELGRNRGPKLNAMLRLGVLQPEVYKQSLPGSNC-KHPEIK 1109
Human 1110 KQEYEEVVQTVN------TDFSPYLISDNLEQPMGSSHASQVCSETPDDLLDDGEIKE-DTSFAE 1167
Human 1168 NDIKESSAVFSKSVQKGELSRSPSPFTHTHLAQ-----GYRRGAKKLESSEENLSSEDEELPCFQ 1227
Human 1228 HLLFGKVNNIPSQSTRHSTVATECLSKNTE-------ENLLSLKNSLND--CSNQVILAKASQEH 1283
Human 1284 HLSEETKCSASLFSSQCSELEDLTANTNTQDPFLIGSSKQMRHQSESQGVG---LSDKELVSDDE 1345
Human 1346 ERGTGL-EENNQEEQSMDSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQ 1409
Human 1410 EMAELEAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKDSHIHGQRNNSMFSKRPREHI- 1473
Human 1474 -SVLTSQKSSEYPISQN-------PEGLSADKFEVSADSSTSKNKEPGVERSSPSKCPSLDDRWY 1530
Human 1531 MHSCSGSLQNRNYPSQEELIKVVDVEEQQLEESGPHDLTETSYLPRQDLEGTPYLESGIS----- 1590
Human 1591 LFSDDPES-----DPSEDRAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAME 1650
Human 1651 ESVSREKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1715
Human 1716 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRK 1780
Human 1781 IFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDA-WTEDNGFHA 1844
Human 1845 IGQMCEAPVVTREWVLDSVALYQCQELDTYL 1875 |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 129 | 1.000 | Domainoid score | I24518 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 480 | 1.000 | Inparanoid score | I7951 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG51748 | |
OrthoDB | 1 | 1.010 | - | - | D113563at32523 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0013864 | |
OrthoInspector | 1 | 1.000 | - | - | oto149866 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13763 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X11403 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.080 |