DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPTBN2 and cher

DIOPT Version :10

Sequence 1:NP_001397954.1 Gene:SPTBN2 / 6712 HGNCID:11276 Length:2397 Species:Homo sapiens
Sequence 2:NP_001262659.2 Gene:cher / 42066 FlyBaseID:FBgn0014141 Length:2577 Species:Drosophila melanogaster


Alignment Length:310 Identity:102/310 - (32%)
Similarity:156/310 - (50%) Gaps:35/310 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     7 SRVHGNGL-HEASEFYYEAVEGA------HNPGGLLLSPAAFINPAQYASVLEGRF-KQLQDERE 63
            |..:.|.| |..|..::.|.:.|      |........||.  ...|.|...|..| :.::.||:
  Fly   117 SNSNNNNLEHNFSNLHFYAQQPAAHYDVCHQQTNDYYQPAR--QEGQQADQYEENFDEDMEAERD 179

Human    64 --------AVQKKTFTKWVNSHLARVTCRVGDLYSDLRDGRNLLRLLEVLSGEILPK----PTKG 116
                    .:|:.|||:|.|.||..:...:.:|.:||.||..|:.|:||||.:.:||    ||  
  Fly   180 LAEDAQWKKIQQNTFTRWANEHLKTIDRSINNLETDLSDGLRLIALIEVLSQKRMPKYNKRPT-- 242

Human   117 RMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKE 181
             .|...||||..||:||:::.:.:.|:.|.||||...:|.|||:||:||.:.|.....:.||:|:
  Fly   243 -FRSQKLENVSVALKFLQDEGIKIVNIDSSDIVDCKLKLILGLIWTLILHYSISMPMWDGEDDKQ 306

Human   182 KKSA----KDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLL-DFESLKKCNAH 241
            ...:    |..||.|...|   .|::.::|||..|..|.|..|:|....|.|. |:|.....:|.
  Fly   307 LNGSGHTPKQRLLNWIHAK---IPDLPINNFTNDWTTGKAVGALVDACAPGLCPDWELWDPKDAV 368

Human   242 YNLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMK 291
            .|...|..||:..|.:.:|:.||::.....||:|::||::.|.:  ||:|
  Fly   369 QNASEAMGLADDWLNVRQLIKPEELVNPNVDEQSMMTYLSQYPN--SKLK 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPTBN2NP_001397954.1 CH_SPTB-like_rpt1 52..166 CDD:409095 49/126 (39%)
CH_SPTBN2_rpt2 180..298 CDD:409170 37/117 (32%)
Spectrin 312..421 CDD:395348
Spectrin 436..529 CDD:395348
SPEC 541..753 CDD:238103
SPEC 756..965 CDD:238103
SPEC 968..1179 CDD:238103
SPEC 1181..1390 CDD:238103
SPEC 1391..1595 CDD:238103
SPEC 1596..1808 CDD:238103
SPEC 1809..2017 CDD:238103
SPEC 2025..>2082 CDD:197544
dnaA <2104..>2248 CDD:455861
PH_beta_spectrin 2228..2331 CDD:269975
cherNP_001262659.2 CH_dFLNA-like_rpt1 175..297 CDD:409160 49/124 (40%)
CH_dFLNA-like_rpt2 298..415 CDD:409164 37/121 (31%)
IG_FLMN 432..527 CDD:214720
IG_FLMN 532..627 CDD:214720
IG_FLMN 631..724 CDD:214720
IG_FLMN 728..815 CDD:214720
IG_FLMN 821..913 CDD:214720
IG_FLMN 918..1001 CDD:214720
Filamin 1012..1098 CDD:395505
IG_FLMN 1109..1196 CDD:214720
Filamin 1197..1293 CDD:395505
IG_FLMN 1302..1392 CDD:214720
IG_FLMN 1395..1490 CDD:214720
IG_FLMN 1494..1587 CDD:214720
IG_FLMN 1606..1682 CDD:214720
IG_FLMN <1731..1791 CDD:214720
IG_FLMN 1797..1884 CDD:214720
IG_FLMN 1978..2067 CDD:214720
Filamin <2111..2159 CDD:395505
IG_FLMN 2172..2260 CDD:214720
IG_FLMN 2265..2354 CDD:214720
IG_FLMN 2360..2448 CDD:214720
IG_FLMN 2488..2577 CDD:214720
Blue background indicates that the domain is not in the aligned region.

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