DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf128 and SPAC57A7.09

DIOPT Version :9

Sequence 1:NP_075759.3 Gene:Rnf128 / 66889 MGIID:1914139 Length:428 Species:Mus musculus
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:354 Identity:74/354 - (20%)
Similarity:137/354 - (38%) Gaps:101/354 - (28%)


- Green bases have known domain annotations that are detailed below.


Mouse    43 WTAYLNVSWRVPHTGVNRTVWELSEEGVYGQ---DSPLEPVSGVLVPPDGPGALNACNPHTNFTV 104
            :.|..:|:.::|...|  |:|  |.:.|:|:   ::....|..:.:|.:....::.| |:.|.|.
pombe    39 FAASTDVAIQLPDRNV--TLW--SRQAVFGKHFTNASATTVINLYLPSNFQEDMSGC-PNRNDTD 98

Mouse   105 PTVW----------------------GSTVQ-----------VSWLALIQRGGGCTFADKIHLAS 136
            .:.:                      .:.||           :....|:|| |.||:.||...|.
pombe    99 ASYFYENDIIDYDIEYIEQKSYSSKPSARVQKDDGGESKDEAILDFLLVQR-GKCTYFDKALEAQ 162

Mouse   137 ERGASGAVI-FNFPGTRNEVIPMSHPGAGD-----IVAIMIG----NLKGTKILQSIQRGIQV-T 190
            ..|..|.:: .|...:...:..|..|...|     |.::.:.    ||..:.:|.|.::.::: .
pombe   163 RLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFVSTSSYNLLWSDLLHSYRQPLKLYA 227

Mouse   191 MVIEVGKKHGPWVNHYS---IFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAK 252
            ...|:|....|::..:|   |..::|.     |..:..||       |..|.:|:.:|       
pombe   228 KPEELGDMFWPFLLCFSPSIIMLITVQ-----ALAIRKFI-------RTYRTKSKTRR------- 273

Mouse   253 KAIGKLQLRTL-KQG----DKEI-------------------GPDGDSCAVCIELYKPNDLVRIL 293
             .|..|..||: ::|    ::||                   ...|..|.:|:|.:...|.|..|
pombe   274 -FIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVECVICLESFTKGDKVVAL 337

Mouse   294 TCNHIFHKTCVDPWLLEHR-TCPMCKCDI 321
            .|.|.||:.|:..|::::| .||.|..::
pombe   338 PCKHEFHRPCIAKWIVDYRHACPTCNTEV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf128NP_075759.3 PA_GRAIL_like 48..193 CDD:239037 36/191 (19%)
zf-RING_2 275..318 CDD:290367 15/43 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..428
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 74/354 (21%)
Peptidases_S8_S53 <144..211 CDD:299169 17/67 (25%)
zf-RING_2 320..362 CDD:290367 15/41 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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