DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf128 and rnf13

DIOPT Version :10

Sequence 1:NP_075759.3 Gene:Rnf128 / 66889 MGIID:1914139 Length:428 Species:Mus musculus
Sequence 2:NP_593372.1 Gene:rnf13 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:354 Identity:74/354 - (20%)
Similarity:137/354 - (38%) Gaps:101/354 - (28%)


- Green bases have known domain annotations that are detailed below.


Mouse    43 WTAYLNVSWRVPHTGVNRTVWELSEEGVYGQ---DSPLEPVSGVLVPPDGPGALNACNPHTNFTV 104
            :.|..:|:.::|...|  |:|  |.:.|:|:   ::....|..:.:|.:....::.| |:.|.|.
pombe    39 FAASTDVAIQLPDRNV--TLW--SRQAVFGKHFTNASATTVINLYLPSNFQEDMSGC-PNRNDTD 98

Mouse   105 PTVW----------------------GSTVQ-----------VSWLALIQRGGGCTFADKIHLAS 136
            .:.:                      .:.||           :....|:|| |.||:.||...|.
pombe    99 ASYFYENDIIDYDIEYIEQKSYSSKPSARVQKDDGGESKDEAILDFLLVQR-GKCTYFDKALEAQ 162

Mouse   137 ERGASGAVI-FNFPGTRNEVIPMSHPGAGD-----IVAIMIG----NLKGTKILQSIQRGIQV-T 190
            ..|..|.:: .|...:...:..|..|...|     |.::.:.    ||..:.:|.|.::.::: .
pombe   163 RLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFVSTSSYNLLWSDLLHSYRQPLKLYA 227

Mouse   191 MVIEVGKKHGPWVNHYS---IFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAK 252
            ...|:|....|::..:|   |..::|.     |..:..||       |..|.:|:.:|       
pombe   228 KPEELGDMFWPFLLCFSPSIIMLITVQ-----ALAIRKFI-------RTYRTKSKTRR------- 273

Mouse   253 KAIGKLQLRTL-KQG----DKEI-------------------GPDGDSCAVCIELYKPNDLVRIL 293
             .|..|..||: ::|    ::||                   ...|..|.:|:|.:...|.|..|
pombe   274 -FIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVECVICLESFTKGDKVVAL 337

Mouse   294 TCNHIFHKTCVDPWLLEHR-TCPMCKCDI 321
            .|.|.||:.|:..|::::| .||.|..::
pombe   338 PCKHEFHRPCIAKWIVDYRHACPTCNTEV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf128NP_075759.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..428
PA_GRAIL_like 48..193 CDD:239037 36/191 (19%)
HRD1 <268..>368 CDD:227568 19/74 (26%)
RING-H2_RNF128-like 275..323 CDD:438454 16/48 (33%)
rnf13NP_593372.1 COG5540 1..369 CDD:227827 74/354 (21%)
Blue background indicates that the domain is not in the aligned region.

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