DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf128 and H10E21.5

DIOPT Version :9

Sequence 1:NP_075759.3 Gene:Rnf128 / 66889 MGIID:1914139 Length:428 Species:Mus musculus
Sequence 2:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans


Alignment Length:247 Identity:78/247 - (31%)
Similarity:125/247 - (50%) Gaps:31/247 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse   207 SIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGKLQLRTLKQG-DKEI 270
            |:.|||:||.|:...::.:.:||..:|.|.|.|:.|.||:|...|:||:.::...|:..| .:|:
 Worm   159 SVLFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKALTRIPTMTITPGMTQEL 223

Mouse   271 GPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDV---- 331
            ..|   ||||::.|:..|::|:|.|.||:||:|:||||||||||||||.||||..|...|:    
 Worm   224 QSD---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDILKHFGYWNDIRNDI 285

Mouse   332 ----------EDGSVSLQVPVSNEASNTASPHEEDSRSETASSGYASVQGADEPPLEEHAQSANE 386
                      :|.::.|::......:.:|.....::.|:|:.|...|...::....|......:.
 Worm   286 QMPTNSRGIADDFTIRLELGEQEHQAPSADVISPEANSDTSDSQGFSFDNSEHHHSESFGYGTSS 350

Mouse   387 NL--QLVNHEAN---------SVAVDVVPHVDNPTFEEDETP-DQEAAVREI 426
            .:  |||.:.:|         |..|...|.... .|.....| |..|::.|:
 Worm   351 TVPPQLVLNASNAKSFVMPLSSRGVSQGPQASR-DFRSARAPRDHRASLHEL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf128NP_075759.3 PA_GRAIL_like 48..193 CDD:239037
zf-RING_2 275..318 CDD:290367 26/42 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..428 18/97 (19%)
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 62/168 (37%)
RING-H2_GRAIL 226..273 CDD:319582 31/49 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 84 1.000 Domainoid score I5750
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm16989
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.970

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