DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf128 and H10E21.5

DIOPT Version :10

Sequence 1:NP_075759.3 Gene:Rnf128 / 66889 MGIID:1914139 Length:428 Species:Mus musculus
Sequence 2:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans


Alignment Length:247 Identity:78/247 - (31%)
Similarity:125/247 - (50%) Gaps:31/247 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse   207 SIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGKLQLRTLKQG-DKEI 270
            |:.|||:||.|:...::.:.:||..:|.|.|.|:.|.||:|...|:||:.::...|:..| .:|:
 Worm   159 SVLFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKALTRIPTMTITPGMTQEL 223

Mouse   271 GPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDV---- 331
            ..|   ||||::.|:..|::|:|.|.||:||:|:||||||||||||||.||||..|...|:    
 Worm   224 QSD---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDILKHFGYWNDIRNDI 285

Mouse   332 ----------EDGSVSLQVPVSNEASNTASPHEEDSRSETASSGYASVQGADEPPLEEHAQSANE 386
                      :|.::.|::......:.:|.....::.|:|:.|...|...::....|......:.
 Worm   286 QMPTNSRGIADDFTIRLELGEQEHQAPSADVISPEANSDTSDSQGFSFDNSEHHHSESFGYGTSS 350

Mouse   387 NL--QLVNHEAN---------SVAVDVVPHVDNPTFEEDETP-DQEAAVREI 426
            .:  |||.:.:|         |..|...|.... .|.....| |..|::.|:
 Worm   351 TVPPQLVLNASNAKSFVMPLSSRGVSQGPQASR-DFRSARAPRDHRASLHEL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf128NP_075759.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..428 18/97 (19%)
PA_GRAIL_like 48..193 CDD:239037
HRD1 <268..>368 CDD:227568 42/113 (37%)
RING-H2_RNF128-like 275..323 CDD:438454 30/47 (64%)
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 62/168 (37%)
RING-H2_RNF130-like 226..271 CDD:438330 29/47 (62%)
Blue background indicates that the domain is not in the aligned region.

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