DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPG7 and AFG3

DIOPT Version :9

Sequence 1:NP_001350779.1 Gene:SPG7 / 6687 HGNCID:11237 Length:809 Species:Homo sapiens
Sequence 2:NP_010933.1 Gene:AFG3 / 856737 SGDID:S000000819 Length:761 Species:Saccharomyces cerevisiae


Alignment Length:755 Identity:302/755 - (40%)
Similarity:438/755 - (58%) Gaps:82/755 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     5 LLLLRALRRGPGPGPRPLWGPGPAWSPGFPARPGRGRPYMASRPPGDLAEAGGRALQSLQLRLLT 69
            :::.:...||   .||.|    .:.|.|..:|....:|.:.||.|             :..||.|
Yeast     1 MMMWQRYARG---APRSL----TSLSFGKASRISTVKPVLRSRMP-------------VHQRLQT 45

Human    70 PTFEGINGLLLKQHLVQN-PVRLWQLLGGTFYFNTSRLKQK--NKE--------KDKSKGKAPEE 123
                 ::||..:..:.:: .:|       :|:.:.:||.:.  |||        ||.:..|   |
Yeast    46 -----LSGLATRNTIHRSTQIR-------SFHISWTRLNENRPNKEGEGKNNGNKDNNSNK---E 95

Human   124 DEEERRRRERDDQMY---RERLRTLLV---IAVVMSLLNALSTSGGS-----ISWNDFVHEMLAK 177
            |.:::|........|   :|...|:.:   ..::.:||...|.:.|.     :::.||..:.|.|
Yeast    96 DGKDKRNEFGSLSEYFRSKEFANTMFLTIGFTIIFTLLTPSSNNSGDDSNRVLTFQDFKTKYLEK 160

Human   178 GEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIEAKDRIP 242
            |.|.::.||.:..|....::...||          ...:.::|.|||::...:|.|||..:||||
Yeast   161 GLVSKIYVVNKFLVEAELVNTKQVV----------SFTIGSVDIFEEQMDQIQDLLNIPPRDRIP 215

Human   243 VSY-KRTGFFGNALYSVGMTAVGLAILWYVFRLAGMT------GREGGFSAFNQLKMARFTIVDG 300
            :.| :|:..| ..|:....|.:.|..|:::.|....:      |..||......:..:|..:.:.
Yeast   216 IKYIERSSPF-TFLFPFLPTIILLGGLYFITRKINSSPPNANGGGGGGLGGMFNVGKSRAKLFNK 279

Human   301 KMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
            :....:|||:|||..|||.|:.|||.:||:|.::.:||||:|:||:|.||||.||||||||.|.|
Yeast   280 ETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344

Human   366 AQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMS-GFSNTEE 429
            |.||||:::|.||||:..|:||:|||.||.:||:.||.|::||||||:||:|....: |.:|.|.
Yeast   345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDER 409

Human   430 EQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLK 494
            |.|||||||||||..|:|.|:|||.|||.|:||.|||||||.|||:.||.|.:..|::|:..|||
Yeast   410 EATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLK 474

Human   495 SLK----LTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAG 555
            .|.    ||......|.:||.|||||:||||||.||||||.|||.....:...:||.|:|||:||
Yeast   475 RLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAG 539

Human   556 TAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKE 620
            ..||:::|||||::.||:||:|||:.||.|::.:.::||||.||...|||:||.||.||:|.::|
Yeast   540 LEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEE 604

Human   621 QLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMG 685
            |...||.||||||.||.|.|..|||||.||.:|||::|.:||...||:|.||.:|| :..:|...
Yeast   605 QFRHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSF-DQNDGNFK 668

Human   686 IGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKL 725
            : .:|||....:.:|.|.:.:|..|:|...::|..||||:
Yeast   669 V-NKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKV 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPG7NP_001350779.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..133 9/34 (26%)
FtsH_ext 145..242 CDD:310823 25/104 (24%)
TIP49 265..729 CDD:332389 237/472 (50%)
AFG3NP_010933.1 FtsH_ext 124..215 CDD:377663 25/100 (25%)
FtsH_fam 223..730 CDD:273520 240/488 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43655
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.