DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPG7 and Spg7

DIOPT Version :9

Sequence 1:NP_001350779.1 Gene:SPG7 / 6687 HGNCID:11237 Length:809 Species:Homo sapiens
Sequence 2:XP_008770841.1 Gene:Spg7 / 353231 RGDID:727940 Length:781 Species:Rattus norvegicus


Alignment Length:729 Identity:642/729 - (88%)
Similarity:679/729 - (93%) Gaps:0/729 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAVLLLLLRALRRGPGPGPRPLWGPGPAWSPGFPARPGRGRPYMASRPPGDLAEAGGRALQSLQL 65
            ||..||||||||:.|.|||..||......|||..:..|..|||:....|..||.|||...|||.|
  Rat     1 MAAALLLLRALRQSPEPGPWRLWAQLSGRSPGLFSGAGGRRPYVVRGTPIGLAAAGGHTPQSLLL 65

Human    66 RLLTPTFEGINGLLLKQHLVQNPVRLWQLLGGTFYFNTSRLKQKNKEKDKSKGKAPEEDEEERRR 130
            |:|||:|||::|||||:|:|.:.:|||||.|.|.|||||.||||||:.||.||||||:|||||||
  Rat    66 RILTPSFEGVSGLLLKRHIVPSAIRLWQLSGSTLYFNTSGLKQKNKDDDKPKGKAPEDDEEERRR 130

Human   131 RERDDQMYRERLRTLLVIAVVMSLLNALSTSGGSISWNDFVHEMLAKGEVQRVQVVPESDVVEVY 195
            :||:|||||||||||.:||:||||||:||||||||||.|||:|||||||||||||||||||||||
  Rat   131 KEREDQMYRERLRTLFIIAIVMSLLNSLSTSGGSISWADFVNEMLAKGEVQRVQVVPESDVVEVY 195

Human   196 LHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIEAKDRIPVSYKRTGFFGNALYSVGM 260
            |||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||::||
  Rat   196 LHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGM 260

Human   261 TAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFV 325
            |||||||||||||||||||||||||||||||||||||||||.||||||:||||||||||||||||
  Rat   261 TAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFV 325

Human   326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARV 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARV 390

Human   391 RSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAST 455
            |||||||||||||||||||||||||||||:|||||||||||||||||||||||||.|||||||||
  Rat   391 RSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLAST 455

Human   456 NRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGAD 520
            ||||:||.|||||||||||||||||||||||||||||||.|||||.|:|||||||||||||||||
  Rat   456 NRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGAD 520

Human   521 IANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWML 585
            ||||||||||||||||||||||.|||||||||:|||||||||||||||:||||||||||||||:|
  Rat   521 IANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLL 585

Human   586 EHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSGAQDD 650
            |||||||||||.|||||||||:|||||||:|||||||||||||||||||:||:||:.||||||||
  Rat   586 EHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDD 650

Human   651 LRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTE 715
            |||||||||||||||||||.|||:|||||||||:||||||||||||||||||||||||:||||||
  Rat   651 LRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTE 715

Human   716 KVLQDNLDKLQARA 729
            |||.||||||||.|
  Rat   716 KVLLDNLDKLQALA 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPG7NP_001350779.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..133 19/24 (79%)
FtsH_ext 145..242 CDD:310823 89/96 (93%)
TIP49 265..729 CDD:332389 438/463 (95%)
Spg7XP_008770841.1 FtsH_ext 145..242 CDD:310823 89/96 (93%)
TIP49 265..748 CDD:332389 439/465 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 342 1.000 Domainoid score I13204
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31133
Inparanoid 1 1.050 1358 1.000 Inparanoid score I3316
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG48979
OrthoDB 1 1.010 - - D109623at7742
OrthoFinder 1 1.000 - - FOG0005483
OrthoInspector 1 1.000 - - oto135516
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR43655
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4433
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1414.580

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