DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and sparc

DIOPT Version :10

Sequence 1:NP_001296373.1 Gene:SPARC / 6678 HGNCID:11219 Length:341 Species:Homo sapiens
Sequence 2:NP_001001942.1 Gene:sparc / 321357 ZFINID:ZDB-GENE-030131-9 Length:291 Species:Danio rerio


Alignment Length:295 Identity:228/295 - (77%)
Similarity:254/295 - (86%) Gaps:12/295 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MRAWIFFLLCLAGRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAEETEEE 65
            ||.|||||.||||:.||||.:|         |..|.|  |:.||.||||||.||||: |.|..|:
Zfish     1 MRVWIFFLFCLAGKTLAAPTEE---------EPAVEE--ELEVGINPVQVETGEFDE-AIEVVED 53

Human    66 VVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 130
            |:|||||.|||||.|||||:|::|.||||||||.:||||||:||.||..:|||::||||||||||
Zfish    54 VIAENPCLNHHCKKGKVCEVDDSNQPMCVCQDPLTCPAPIGDFEHVCGTNNKTYESSCHFFATKC 118

Human   131 TLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLR 195
            :|||||||||||:|||||||||.|||::||.||||||||||||||||||||||||||||||||||
Zfish   119 SLEGTKKGHKLHIDYIGPCKYIAPCLENELNEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLR 183

Human   196 VKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI 260
            ||||:||||||:||||.::|||.|||||||||||||||||||||||||||:||||||||||||||
Zfish   184 VKKIYENEKRLQAGDHSLDLLALDFEKNYNMYIFPVHWQFGQLDQHPIDGFLSHTELAPLRAPLI 248

Human   261 PMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQR 295
            |||||||.|||.||.|.||||||:|||.|||||::
Zfish   249 PMEHCTTSFFEQCDADQDKYIALEEWANCFGIKEQ 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001296373.1 FSL_SPARC 71..152 CDD:238649 63/80 (79%)
EFh_SPARC_like 155..294 CDD:320010 122/138 (88%)
EF-hand motif 227..260 CDD:320010 31/32 (97%)
EF-hand motif 262..294 CDD:320010 25/31 (81%)
sparcNP_001001942.1 FSL_SPARC 59..140 CDD:238649 63/80 (79%)
EFh_SPARC_SPARC 143..282 CDD:320014 122/138 (88%)
EF-hand motif 215..248 CDD:320014 31/32 (97%)
EF-hand motif 250..282 CDD:320014 25/31 (81%)

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