DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPARC and Fs

DIOPT Version :9

Sequence 1:NP_001296373.1 Gene:SPARC / 6678 HGNCID:11219 Length:341 Species:Homo sapiens
Sequence 2:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster


Alignment Length:243 Identity:52/243 - (21%)
Similarity:78/243 - (32%) Gaps:90/243 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    69 ENPCQNHHCKHGKVCELDENNTPMCV-CQDPTSCP--------APIGEFEKVCSNDNKTFDSSCH 124
            :|.|...||.:|..|..|:...|.|: |:  ..||        :...|.:.||..|.||:.|:|.
  Fly   605 KNSCSGVHCLNGLTCVEDQYLMPHCIACR--IECPWDNLDVDSSGYDERQAVCGVDGKTYRSACD 667

Human   125 FFATKCTLEGTKKGHKLHLDYIGPCKY-IPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLL 188
            .....|     |.|..:.:.|.|||:. ...|.|.:...     :|   |.||.|..|..  ..:
  Fly   668 INRMIC-----KIGRSIAVAYPGPCRAGRVSCADIKCGP-----KD---NCLVDLQTRQP--RCV 717

Human   189 TEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELA 253
            |.:.|...|:           ..||..:.....:.||.:.        ::.:|            
  Fly   718 TCRYKCPRKQ-----------QRPVHKICGYNNQTYNSWC--------EMHKH------------ 751

Human   254 PLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQRYRQGSC 301
                      .|.:|:|                   .|:|.   ||||
  Fly   752 ----------SCESRYF-------------------IGVKS---QGSC 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001296373.1 FSL_SPARC 71..152 CDD:238649 26/90 (29%)
SPARC_Ca_bdg 153..287 CDD:287550 19/133 (14%)
SPARC_EC 154..290 CDD:238155 19/135 (14%)
FsNP_652376.2 KAZAL 564..604 CDD:197624
KAZAL_FS 654..687 CDD:238052 12/37 (32%)
KAZAL_FS 723..767 CDD:238052 13/106 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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