DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and ost-1

DIOPT Version :10

Sequence 1:NP_001296373.1 Gene:SPARC / 6678 HGNCID:11219 Length:341 Species:Homo sapiens
Sequence 2:NP_500039.1 Gene:ost-1 / 176931 WormBaseID:WBGene00003893 Length:264 Species:Caenorhabditis elegans


Alignment Length:304 Identity:95/304 - (31%)
Similarity:148/304 - (48%) Gaps:58/304 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     8 LLCLAGRALAAPQQEALPDETEVVEETVAEVTEVSVGANPVQVEVGEFDDGAEETEEE---VVAE 69
            ||.||..:....:::.:.|:                       |:||..|..:..||:   ..|:
 Worm     9 LLLLAASSFVDAKKKKIADD-----------------------ELGELLDNIDADEEKKSVEPAK 50

Human    70 NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGE-FEKVCSNDNKTFDSSCHFFATKCTLE 133
            |||::|.|..||.|.:.:...|.|.|  .:.||...|: .:|||:|:|:||.|.|..:..:|..:
 Worm    51 NPCEDHQCGWGKECVVGKKGEPTCEC--ISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCLCK 113

Human   134 GTKK------GHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQ 192
            ...|      ..|:||:|:|.||.:..|.:..:.:||.||.|||..|:..|.:|.|.:.|  |.:
 Worm   114 RKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRRELHKL--EWE 176

Human   193 KLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRA 257
            :|..:..:::||:                     :::||.|:|.:||..|.|..:||.||.|:.|
 Worm   177 ELLSEAENDDEKK---------------------HVYPVIWKFCELDTKPHDKSVSHHELIPITA 220

Human   258 PLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQRYRQGSC 301
            |:||||.|...|.|.||.:||..|::.||..|.|:|:...|..|
 Worm   221 PVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001296373.1 FSL_SPARC 71..152 CDD:238649 31/87 (36%)
EFh_SPARC_like 155..294 CDD:320010 48/138 (35%)
EF-hand motif 227..260 CDD:320010 15/32 (47%)
EF-hand motif 262..294 CDD:320010 14/31 (45%)
ost-1NP_500039.1 FSL_SPARC 52..138 CDD:238649 31/87 (36%)
EFh_SPARC_like 141..257 CDD:320010 48/138 (35%)
EF-hand motif 190..223 CDD:320010 15/32 (47%)
EF-hand motif 225..257 CDD:320010 14/31 (45%)

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