DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX4 and Sox100B

DIOPT Version :9

Sequence 1:NP_003098.1 Gene:SOX4 / 6659 HGNCID:11200 Length:474 Species:Homo sapiens
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:499 Identity:130/499 - (26%)
Similarity:190/499 - (38%) Gaps:151/499 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    43 GGKADDP-------------SW------CKTPSG----HIKRPMNAFMVWSQIERRKIMEQSPDM 84
            ||:.:|.             .|      .|.|:.    ||||||||||||:|..||.:.:|.|.:
  Fly    38 GGRKEDERITTAVMKVLEGYDWNLVQASAKAPTDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHL 102

Human    85 HNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSGNANSSSSAAASS 149
            .|:|:||.|||.||.||||||.||:..||:||:.|..::|||||:||:|        .:....|.
  Fly   103 QNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRK--------KARVLPSQ 159

Human   150 KPGEKGDKVGGSGG------GGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAG 208
            :.||     |||.|      ...|..|...|||:.|......|..|    |...||.|.::    
  Fly   160 QSGE-----GGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAA----ADLGSCASTIS---- 211

Human   209 GGVSKPHAKLILAGGGGGGKAAAAAAASFAAEQAGAAALL-----------PLGAAADHHSLYKA 262
                  ||.:    |.......:..|...:...|.||:|:           |...|:...||...
  Fly   212 ------HANV----GSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPP 266

Human   263 RTP----SASASASSAASASAALAAPGKHLAEKKVKRVYLFGGLGTSSSPVGGVGAGADPSDPLG 323
            .||    .::|.||:|.:.|..|    :.|:|                 ||...|      |..|
  Fly   267 ATPYNVAPSNAKASAANNPSLLL----RQLSE-----------------PVANAG------DGYG 304

Human   324 LYEEEGAG-CSPDAPSLSGRSSAASSPAAGRSPAD----------HRGYASLRAASPA---PSSA 374
            :..|.|.. .:....:..|:|:...|.|.|.....          :.||...|.:.||   |::.
  Fly   305 VLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTGSRVSYPAYSYPANG 369

Human   375 PSHA-----------SSSASSHSSSSSSSGSSSSDDEFEDDLLDL------------------NP 410
            ...|           :|.|.::..:::.......|..|.|.:|.:                  :|
  Fly   370 GHFATEEQQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHHSP 434

Human   411 SSNFESMSLGSFSSSSALDRDL-----DFNFEPGSGSHFEFPDY 449
            ..| .|.||.|..||::..:.:     ...:.|.:.|..:.|::
  Fly   435 PLN-SSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNF 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX4NP_003098.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 6/37 (16%)
SOX-TCF_HMG-box 58..129 CDD:238684 43/70 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..228 26/105 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..286 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..416 27/156 (17%)
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 42/69 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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