DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SOX3 and Sox14

DIOPT Version :10

Sequence 1:NP_005625.2 Gene:SOX3 / 6658 HGNCID:11199 Length:446 Species:Homo sapiens
Sequence 2:NP_476894.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster


Alignment Length:228 Identity:81/228 - (35%)
Similarity:115/228 - (50%) Gaps:35/228 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    15 RVPADLARSILISL-PFPPDSLAHRPPSSAP--------TESQGLFT----VAAP----APGAPS 62
            |.||..|.|...:| ||.|.......||.||        |:||...|    ||:|    |..||.
  Fly    40 RHPAPKADSTPHTLPPFSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAAAPK 104

Human    63 PPATLAHLLPAP-AMYSLLETELKNPVGTPTQAAGTGGPAAPGGAGKSSANAAGGANSG---GGS 123
            .|.|     |.| :.::...|..:: ...|.:.:...|..:|..:|.....:..|.:|.   |.:
  Fly   105 TPKT-----PEPRSTHTHTHTHSQH-FSPPPRESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSA 163

Human   124 SGGASGGGGGTDQDR--------VKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLL 180
            ....:.....:|..|        :|||||||||||:.:|||:....|.:||:||||.||..|:||
  Fly   164 RVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLL 228

Human   181 TDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRK 213
            :..:|:|:|.||::||.:||.|||:|||||::|
  Fly   229 SKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX3NP_005625.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..48 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..140 9/63 (14%)
HMG-box_SoxB 137..212 CDD:438790 44/82 (54%)
SOXp 208..302 CDD:463537 4/6 (67%)
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 399..407
Sox14NP_476894.1 HMG-box_SoxC 186..261 CDD:438838 43/74 (58%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.