DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX2 and Sox102F

DIOPT Version :10

Sequence 1:NP_003097.1 Gene:SOX2 / 6657 HGNCID:11195 Length:317 Species:Homo sapiens
Sequence 2:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster


Alignment Length:207 Identity:69/207 - (33%)
Similarity:97/207 - (46%) Gaps:50/207 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    11 PPGPQQTSGGGGGNSTAAAAGGN--QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISK 73
            |.......|.|.|:      |||  ..:|...:||||||||||::.:|||:.:..|.||||.|||
  Fly   397 PSSQPLRQGNGHGH------GGNHGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISK 455

Human    74 RLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT--------------KTLMK--- 121
            .|||.||.:|..:|:|:.:|..||..|||::||||:||||.|.              |.||:   
  Fly   456 ILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRR 520

Human   122 ---KDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYA-----HMNGWSNGSYSMMQDQL 178
               :..:...||:....|:..|.....|:|   |.|.::...|     |:...::.:.|      
  Fly   521 AEMRQLWCRTGGVSGGSGSLCADACPKGSG---GSNSQVAVAAAAAVYHLQDMASSAAS------ 576

Human   179 GYPQHPGLNAHG 190
                    .|||
  Fly   577 --------TAHG 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX2NP_003097.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 8/33 (24%)
HMG-box_SoxB 39..118 CDD:438790 44/92 (48%)
SOXp 110..200 CDD:463537 22/106 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..266
9aaTAD. /evidence=ECO:0000250|UniProtKB:P41225 272..280
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..317
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 43/76 (57%)
Blue background indicates that the domain is not in the aligned region.

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