DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX2 and Sox14

DIOPT Version :10

Sequence 1:NP_003097.1 Gene:SOX2 / 6657 HGNCID:11195 Length:317 Species:Homo sapiens
Sequence 2:NP_476894.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster


Alignment Length:299 Identity:93/299 - (31%)
Similarity:139/299 - (46%) Gaps:63/299 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    34 QKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 98
            :|:||..:|||||||||||:.:|||:.:..|.:||:||||.||..|:|||:.:|:|:|.||::||
  Fly   180 KKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLR 244

Human    99 ALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHM 163
            .|||.|:|:|||||::         |.|...|.|.|                   ||..|.....
  Fly   245 KLHMIEYPNYKYRPQK---------KQTRSPGSLKP-------------------NQDADGCEAR 281

Human   164 NGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGS------PT 222
            |..:|.:.|:..          |..:|........:...|..|  |.::|:...|.|      |.
  Fly   282 NDTTNNNNSLTT----------LAINGTTTAGRKSKRSTSTCQ--SGSASKRLRNDSGDTSSKPK 334

Human   223 YSM---SYSQQGTPGMALGSMGSVVKSEASSSPPVVTSSS-------HSR---APCQAGD-LRDM 273
            |.:   |..|..:..:.|.|..:::..::|...|:.|.|:       ||.   .|.::.: |.::
  Fly   335 YEVKMESAEQLNSADIILPSADNLISYQSSEYLPLSTLSNADCDEKLHSELSSGPLESRENLSEV 399

Human   274 ISMYLP---GAEVPEPAAPSRLHMSQHYQSGPVPGTAIN 309
            ::.:||   |.........|.|..|||.||.|..|...|
  Fly   400 VNRFLPLFLGGNEDSQLGVSSLTQSQHNQSDPTAGLMDN 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX2NP_003097.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 3/8 (38%)
HMG-box_SoxB 39..118 CDD:438790 44/78 (56%)
SOXp 110..200 CDD:463537 16/89 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..266 7/32 (22%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:P41225 272..280 2/10 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..317 6/13 (46%)
Sox14NP_476894.1 HMG-box_SoxC 186..261 CDD:438838 44/83 (53%)

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