DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAPN15 and Capn15

DIOPT Version :9

Sequence 1:XP_011520922.1 Gene:CAPN15 / 6650 HGNCID:11182 Length:1162 Species:Homo sapiens
Sequence 2:XP_008765793.1 Gene:Capn15 / 303000 RGDID:1306514 Length:1193 Species:Rattus norvegicus


Alignment Length:1210 Identity:1021/1210 - (84%)
Similarity:1061/1210 - (87%) Gaps:65/1210 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGSSASSLAAETESDHSFPGGPPYPGPPAAAGWCRSGPGGPVWGGALVSRQHQPPRPRARSHTHS 65
            ||||||||||||||||.|||||||||||.||||||||||..|||.|||:|||  |||||||||||
  Rat     1 MGSSASSLAAETESDHGFPGGPPYPGPPTAAGWCRSGPGETVWGSALVTRQH--PRPRARSHTHS 63

Human    66 PGSMATVGEWSCVRCTFLNPAGQRQCSICEAPRHKPDLNHILRLSVEEQKWPCARCTFRNFLGKE 130
            ||||||||||||.|||||||||||||||||||||||||:.|||||||||||||||||||||||||
  Rat    64 PGSMATVGEWSCARCTFLNPAGQRQCSICEAPRHKPDLDQILRLSVEEQKWPCARCTFRNFLGKE 128

Human   131 ACEVCGFTPEPAPGAAFLPVLNGVLPKPPAILGEPKGSCQEEAGPVRTAGLVATEPARGQCEDKD 195
            |||||||||||.|||..||::||||||||.||.||||:.:||.||||||||||||||||..| |:
  Rat   129 ACEVCGFTPEPVPGAPLLPIINGVLPKPPTILVEPKGNSKEETGPVRTAGLVATEPARGHPE-KE 192

Human   196 EEEKEEQEEEEGAAEPRGGWACPRCTLHNTPVASSCSVCGGPRRLSLPRIPPEALVVPEVVAPAG 260
            |||||::::.| .|:|..||||.||||||||||||||.|||||:|||||||||||||||||||.|
  Rat   193 EEEKEQEDDGE-RADPGSGWACQRCTLHNTPVASSCSACGGPRKLSLPRIPPEALVVPEVVAPTG 256

Human   261 FHVVPAAPPPGLPGEGAEANPPATSQGP-AAEPEPPRVPPFSPFSSTLQNNPVPRSRREVPPQLQ 324
            |||||....|.||||||||..|:||||| :.:.||||||.|||||.|||||||||||||||||||
  Rat   257 FHVVPPPSQPALPGEGAEAESPSTSQGPTSTDQEPPRVPLFSPFSPTLQNNPVPRSRREVPPQLQ 321

Human   325 PPVPEAAQPSPSAGCRGAPQGSG--WAGASRLAELLS------GKRLSVLEEEATEGGTSRVEAG 381
            |||||.||.|.|...:|..||.|  .|||||||||||      |||||||||||.|...:|.|  
  Rat   322 PPVPEGAQSSASTSSKGPQQGPGRAAAGASRLAELLSGKELLPGKRLSVLEEEAPESSPARCE-- 384

Human   382 SSTSGSDIIDLAGDTVRYTPASPSSPDFTTWSCAKCTLRNPTVAPRCSACGCSKLHGFQEHGEPP 446
               |.||:||||||.|||||||||||||||||||:|||||||.|.|||.||.|||||||||.|||
  Rat   385 ---SCSDVIDLAGDVVRYTPASPSSPDFTTWSCARCTLRNPTTASRCSVCGGSKLHGFQEHSEPP 446

Human   447 THCPDCGADKPSPCGRSCGRVSSAQKAARVLPERPGQWACPACTLLNALRAKHCAACHTPQLLVA 511
            |||||||||||.||..||||..||.||||:||:||||||||||||:|..|||||||||||||||.
  Rat   447 THCPDCGADKPGPCVGSCGRAPSAHKAARLLPDRPGQWACPACTLINTPRAKHCAACHTPQLLVT 511

Human   512 QRRGAAPLRRRESMHVEQRRQTDEGEAKALWENIVAFCRENNVSFVDDSFPPGPESVGFPAGDSV 576
            |.|||.|||||||||||:|||||||||||||||||||||||:|:||||||||||.|||||.||||
  Rat   512 QCRGATPLRRRESMHVEKRRQTDEGEAKALWENIVAFCRENSVNFVDDSFPPGPASVGFPVGDSV 576

Human   577 QQRVRQWLRPQEINCSVFRDHRATWSVFHTLRPSDILQGLLGNCWFLSALAVLAERPDLVERVMV 641
            ||||:|||||.||||||||||...|||||||||||||||||||||||||||||||||||||||||
  Rat   577 QQRVKQWLRPHEINCSVFRDHGTPWSVFHTLRPSDILQGLLGNCWFLSALAVLAERPDLVERVMV 641

Human   642 TRSLCAEGAYQVRLCKDGTWTTVLVDDMLPCDEAGCLLFSQAQRKQLWVALIEKALAKLHGSYFA 706
            |||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
  Rat   642 TRSLCAEGAYQVRLCKDGTWTTVLVDDMLPCDEAGFLLFSQAQRKQLWVALIEKALAKLHGSYFA 706

Human   707 LQAGRAIEGLATLTGAPCESLALQLSSTNPREEPVDTDLIWAKMLSSKEAGFLMGASCGGGNMKV 771
            ||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||
  Rat   707 LQAGRAIEGLATLTGAPCESLALQVSSTNPREEPVDTDLIWAKMLSSKEAGFLMGASCGGGNMKV 771

Human   772 DDSAYESLGLRPRHAYSILDVRDVQGT-----RLLRLRNPWGRFSWNGSWSDEWPHWPGHLRGEL 831
            ||:||||||||||||||:||||||||:     ||||||||||||||||||||||||||||||.||
  Rat   772 DDAAYESLGLRPRHAYSVLDVRDVQGSSPVIHRLLRLRNPWGRFSWNGSWSDEWPHWPGHLRAEL 836

Human   832 MPHGSSEGVFWMEYGDFVRYFDSVDICKVHSDWQEARVQGCFPSSASAPVGVTALTVLERASLEF 896
            ||||||||||||||.||:||||||||||||||||||||||||||:||.|||||||||||||||||
  Rat   837 MPHGSSEGVFWMEYSDFIRYFDSVDICKVHSDWQEARVQGCFPSTASGPVGVTALTVLERASLEF 901

Human   897 ALFQEGSRRSDAVDSHLLDLCILVFRATFGSGGHLSLGRLLAHSKRAVKKFVSCDVMLEPGEYAV 961
            |||||||||||:||||||||||||||||||:||.||||||||||||||||||:||||||||||||
  Rat   902 ALFQEGSRRSDSVDSHLLDLCILVFRATFGTGGRLSLGRLLAHSKRAVKKFVNCDVMLEPGEYAV 966

Human   962 VCCAFNHWGPPLPGTPA----------------------------------PQASSPSAGVPRAS 992
            ||||||||.|..||.||                                  |.||||||||||.:
  Rat   967 VCCAFNHWNPAPPGPPAQGKGPSQMRPTPAFPSSEPQSPPAGKLLAPLSTPPTASSPSAGVPRGA 1031

Human   993 PEPPGHVLAVYSSRLVMVEPVEAQPTTLADAIILLTESRGERHEGREGMTCYYLTHGWAGLIVVV 1057
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat  1032 PEPPGHVLAVYSSRLVMVEPVEAQPTTLADAIILLTESRGERHEGREGMTCYYLTHGWAGLIVVV 1096

Human  1058 ENRHPKAYLHVQCDCTDSFNVVSTRGSLRTQDSVPPLHRSSPVPSPRQVLVILSQLEGNAGFSIT 1122
            ||||||:|||||||||||||||||||||||||||||||        |||||||||||||||||||
  Rat  1097 ENRHPKSYLHVQCDCTDSFNVVSTRGSLRTQDSVPPLH--------RQVLVILSQLEGNAGFSIT 1153

Human  1123 HRLAHRKAAQAFLSDWTASKGTHSPPLTPEVAGLHGPRPL 1162
            |||||||||||||||||||:|||||||||:||||||||||
  Rat  1154 HRLAHRKAAQAFLSDWTASRGTHSPPLTPDVAGLHGPRPL 1193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPN15XP_011520922.1 ZnF_RBZ 73..97 CDD:197784 22/23 (96%)
RanBP2-type Zn finger 75..94 CDD:275376 17/18 (94%)
RanBP2-type Zn finger 116..135 CDD:275376 18/18 (100%)
RanBP2-type Zn finger 169..191 CDD:275375 18/21 (86%)
ZnF_RBZ 213..237 CDD:197784 20/23 (87%)
RanBP2-type Zn finger 215..234 CDD:275375 17/18 (94%)
RanBP2-type Zn finger 412..431 CDD:275376 15/18 (83%)
ZnF_RBZ 482..506 CDD:197784 20/23 (87%)
RanBP2-type Zn finger 484..503 CDD:275376 15/18 (83%)
CysPc 544..859 CDD:238004 297/319 (93%)
Capn15XP_008765793.1 ZnF_RBZ 71..95 CDD:197784 22/23 (96%)
RanBP2-type Zn finger 73..92 CDD:275376 17/18 (94%)
ZnF_RBZ 113..135 CDD:197784 21/21 (100%)
RanBP2-type Zn finger 114..133 CDD:275376 18/18 (100%)
PHA03247 <137..380 CDD:223021 179/244 (73%)
ZnF_RBZ 211..233 CDD:197784 19/21 (90%)
RanBP2-type Zn finger 211..230 CDD:275376 17/18 (94%)
ZnF_RBZ 412..434 CDD:197784 17/21 (81%)
RanBP2-type Zn finger 412..431 CDD:275376 15/18 (83%)
RanBP2-type Zn finger 449..464 CDD:275375 11/14 (79%)
ZnF_RBZ 482..506 CDD:197784 20/23 (87%)
RanBP2-type Zn finger 484..503 CDD:275376 15/18 (83%)
CysPc 544..864 CDD:238004 297/319 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83679837
Domainoid 1 1.000 611 1.000 Domainoid score I4671
eggNOG 1 0.900 - - E1_KOG0045
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45782
Inparanoid 1 1.050 1963 1.000 Inparanoid score I1526
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43254
OrthoDB 1 1.010 - - D111762at33208
OrthoFinder 1 1.000 - - FOG0005761
OrthoInspector 1 1.000 - - oto132510
orthoMCL 1 0.900 - - OOG6_104309
Panther 1 1.100 - - LDO PTHR10183
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4152
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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