DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNTB1 and sntb1

DIOPT Version :10

Sequence 1:XP_054217035.1 Gene:SNTB1 / 6641 HGNCID:11168 Length:636 Species:Homo sapiens
Sequence 2:XP_012820630.1 Gene:sntb1 / 100493340 XenbaseID:XB-GENE-1013041 Length:509 Species:Xenopus tropicalis


Alignment Length:541 Identity:387/541 - (71%)
Similarity:440/541 - (81%) Gaps:35/541 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    99 MAVAAAAAAAGPAGAGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSS---EEGAAAYNGIGT 160
            ||||||.|.            |||.||||||.||||||.||.|.:|||||   .|.|.:.|.:..
 Frog     1 MAVAAAGAL------------RSGWLEVLVRGRWHKVLGNLYESSLVLSSPERPEDAPSSNSMTN 53

Human   161 ATNGSFCRGAGAGHPGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQELGGLGISI 225
            .||                    .||.|||||||:||:.|||:|:|:||.|||:|||||||||||
 Frog    54 GTN--------------------SSPQGVRTAFTELPDTVPEAIANKKRAVKVVKQELGGLGISI 98

Human   226 KGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALKRAGKEVLLEVK 290
            |||||||||||||||||||||||||:||||||||:|||.|||||||||||||||:||:||:||||
 Frog    99 KGGKENKMPILISKIFKGLAADQTQSLYVGDAILTVNGLDLRDATHDEAVQALKKAGREVILEVK 163

Human   291 YMREATPYVKKGSPVSEIGWETPPPESPRLGGSTSDPPSSQSFSFHRDRKSIPLKMCYVTRSMAL 355
            |||||||||||||||||||||||||||||||.::..|||..:.|.|.||||||||||||||||.:
 Frog   164 YMREATPYVKKGSPVSEIGWETPPPESPRLGNTSVCPPSPVALSIHGDRKSIPLKMCYVTRSMTV 228

Human   356 ADPENRQLEIHSPDAKHTVILRSKDSATAQAWFSAIHSNVNDLLTRVIAEVREQLGKTGIAGSRE 420
            .|||||.||:|||||||||:|||.|..||||||:||||..:||::|||.||:||||||||:||.:
 Frog   229 PDPENRNLELHSPDAKHTVVLRSSDPVTAQAWFNAIHSAASDLVSRVITEVKEQLGKTGISGSTD 293

Human   421 IRHLGWLAEKVPGESKKQWKPALVVLTEKDLLIYDSMPRRKEAWFSPVHTYPLLATRLVHSGPGK 485
            |.|||||||||.||::|.||..|:||||||||:||||||.|:||.:|||.|||:|||||||||||
 Frog   294 IGHLGWLAEKVLGENEKHWKAVLMVLTEKDLLMYDSMPRMKDAWLNPVHAYPLIATRLVHSGPGK 358

Human   486 GSPQAGVDLSFATRTGTRQGIETHLFRAETSRDLSHWTRSIVQGCHNSAELIAEISTACTYKNQE 550
            .|...|.:.|||||||::||||||.|||||:||||.||||||||||:||||:.||||.|||||.|
 Frog   359 ISSLPGTEFSFATRTGSKQGIETHFFRAETNRDLSLWTRSIVQGCHHSAELVKEISTPCTYKNNE 423

Human   551 CRLTIHYENGFSITTEPQEGAFPKTIIQSPYEKLKMSSDDGIRMLYLDFGGKDGEIQLDLHSCPK 615
            |||.|:|::||.:|:|..:|.:.:.::|.||||||||||||::||||||||||||:|||||.|||
 Frog   424 CRLVINYDHGFLLTSEALDGTYSRPLLQFPYEKLKMSSDDGVKMLYLDFGGKDGELQLDLHCCPK 488

Human   616 PIVFIIHSFLSAKITRLGLVA 636
            |||||||||||||||||||||
 Frog   489 PIVFIIHSFLSAKITRLGLVA 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNTB1XP_054217035.1 PDZ_syntrophin-like 209..291 CDD:467262 73/81 (90%)
PHsplit_syntrophin <340..397 CDD:269960 44/56 (79%)
PH 421..531 CDD:459697 82/109 (75%)
sntb1XP_012820630.1 PDZ_syntrophin-like 82..164 CDD:467262 73/81 (90%)
PHsplit_syntrophin <205..270 CDD:269960 48/64 (75%)
PH 296..404 CDD:459697 81/107 (76%)

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