DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNTA1 and snta1

DIOPT Version :10

Sequence 1:NP_003089.1 Gene:SNTA1 / 6640 HGNCID:11167 Length:505 Species:Homo sapiens
Sequence 2:NP_001072684.1 Gene:snta1 / 780141 XenbaseID:XB-GENE-962569 Length:473 Species:Xenopus tropicalis


Alignment Length:503 Identity:315/503 - (62%)
Similarity:372/503 - (73%) Gaps:32/503 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASGRRAPRTGLLELRAGAGSGAGGERWQRVLLSLAEDVLTVSPADGDPGPEPGAPREQEPAQLN 65
            |||...|.|:||||||      ..||||.||||.|.|:.:|.:|.     |||||..|:   .||
 Frog     1 MASPGTAHRSGLLELR------CPGERWVRVLLLLGEETVTFTPE-----PEPGAAEEK---ALN 51

Human    66 GAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALF 130
            | |||..|   :||:|:..||.|.|.|.||||||:||||||||||||||||||||||||.|.:|:
 Frog    52 G-AEPAGG---VPESLINLRRTVRVLKQDAGGLGVSIKGGRENKMPILISKIFKGLAADLTGSLY 112

Human   131 VGDAILSVNGEDLSSATHDEAVQVLKKTGKEVVLEVKYMKDVSPYFKNSTGGTSVGWDSPPASPL 195
            ||||||||||.|||.||||:|||.||||||||||||||||::|||||.|....|      ||:||
 Frog   113 VGDAILSVNGVDLSEATHDDAVQALKKTGKEVVLEVKYMKEISPYFKGSPPSGS------PAAPL 171

Human   196 QRQPSSPGPTPRNFSEAKHMSLKMAYVSKRCTPNDPEPRYLEICSADGQDTLFLRAKDEASARSW 260
            |:: .||...|:.:.:.|.:.|||.|||:|..|.|.||||||||||||:|.||.|||||.:|:||
 Frog   172 QKR-GSPALPPKEYKDGKSIPLKMCYVSRRFLPTDTEPRYLEICSADGRDVLFFRAKDEGTAQSW 235

Human   261 ATAIQAQVNTLTPRVKDELQALLAATSTAGSQDIKQIGWLTEQLPSGGTAPTLALLTEKELLLYL 325
            ..||....:.|.|||:::::.||       .:||||:||||||||..|....|||||||:||||.
 Frog   236 FNAIHTNASALAPRVREDVKQLL-------GKDIKQMGWLTEQLPQDGKRNLLALLTEKDLLLYN 293

Human   326 SLPETREALSRPARTAPLIATRLVHSGPSKGSVPYDAELSFALRTGTRHGVDTHLFSVESPQELA 390
            |||.:||..|:||...||||||||||||||.|..||.||:||||:||:.||:|||||||:.:|||
 Frog   294 SLPHSREGFSKPAYCHPLIATRLVHSGPSKSSPLYDTELAFALRSGTQKGVETHLFSVETQRELA 358

Human   391 AWTRQLVDGCHRAAEGVQEVSTACTWNGRPCSLSVHIDKGFTLWAAEPGAARAVLLRQPFEKLQM 455
            .|||.||||||.|||.::||:|||||.|..|:||:|||:||||:..|||..:.:...||||||:|
 Frog   359 TWTRVLVDGCHSAAELIKEVTTACTWGGNECALSIHIDQGFTLFTEEPGLNKVIHFHQPFEKLRM 423

Human   456 SSDDGASLLFLDFGGAEGEIQLDLHSCPKTIVFIIHSFLSAKVTRLGL 503
            |||||..:|:|:||..|.|:|||||||||||||||||||||||:||||
 Frog   424 SSDDGVRILYLEFGNPEAELQLDLHSCPKTIVFIIHSFLSAKVSRLGL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNTA1NP_003089.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 11/23 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..77 15/36 (42%)
PDZ_syntrophin-like 86..168 CDD:467262 68/81 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..210 9/29 (31%)
PHsplit_syntrophin <209..270 CDD:269960 35/60 (58%)
PH 298..401 CDD:459697 72/102 (71%)
Calmodulin-binding. /evidence=ECO:0000250 483..505 20/21 (95%)
snta1NP_001072684.1 PDZ_syntrophin-like 68..150 CDD:467262 68/81 (84%)
PHsplit_syntrophin <188..245 CDD:269960 35/56 (63%)
PH 262..369 CDD:459697 75/106 (71%)

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