DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNTA1 and snta1

DIOPT Version :10

Sequence 1:NP_003089.1 Gene:SNTA1 / 6640 HGNCID:11167 Length:505 Species:Homo sapiens
Sequence 2:XP_073810883.1 Gene:snta1 / 100332905 ZFINID:ZDB-GENE-120919-5 Length:479 Species:Danio rerio


Alignment Length:510 Identity:277/510 - (54%)
Similarity:354/510 - (69%) Gaps:36/510 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASGRRAPRTGLLELRAGAGSGAGGERWQRVLLSLAEDVLTVSPAD-----GDPGPEPGAPREQE 60
            ||:..:..::||||||...      ..|.|||.:|..|..||||.:     ....|.|||....:
Zfish     1 MAAAVKPVKSGLLELRVTV------HHWIRVLATLTGDTFTVSPGETAEESASNSPAPGAAVNGD 59

Human    61 PAQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQ 125
            ||.|:      |.|  :|:.:...:|.|.|.|.:.||||||||||:|||||||||||||||||||
Zfish    60 PANLS------ASP--VPDTITNVKRTVRVTKQEVGGLGISIKGGKENKMPILISKIFKGLAADQ 116

Human   126 TEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGKEVVLEVKYMKDVSPYFKNSTGGTSVGWDSP 190
            ||||:||||||||||.||..||||||||.||||||||:|||||:|::|.:||..:.|..| .|||
Zfish   117 TEALYVGDAILSVNGNDLREATHDEAVQALKKTGKEVILEVKYIKEMSAFFKGGSTGPPV-LDSP 180

Human   191 PASPLQRQPSSPGPTPRNFSEAKHMSLKMAYVSKRCTPNDPEPRYLEICSADGQDTLFLRAKDEA 255
            ||:| |:|      |.....|.:.:.|:|.:|:::..|.|||.||.|:.|:|.:.::||||||.|
Zfish   181 PATP-QKQ------TDPALKETRTIPLRMCHVTRKQCPPDPEDRYFEVVSSDRKTSVFLRAKDHA 238

Human   256 SARSWATAIQAQVNTLTPRVKDELQALLAATSTAGSQDIKQIGWLTEQLPSGGTAPTLALLTEKE 320
            .|::|..:||:....|....||||:.|      ..|.:|..|||:.||   |...|.||:||:::
Zfish   239 MAQAWYNSIQSSSAALLNTAKDELKTL------QPSLNIIHIGWIIEQ---GSERPILAVLTDRD 294

Human   321 LLLYLSLPETREALSRPARTAPLIATRLVHSGPSKGSVPYDAELSFALRTGTRHGVDTHLFSVES 385
            ||||.:||:::|.|:.|.::.|||.||||||||.|.|..:|:||:|.||.||:.||:||||.|:|
Zfish   295 LLLYGALPDSKETLNSPDKSYPLITTRLVHSGPGKSSSVHDSELTFGLRLGTKQGVETHLFRVDS 359

Human   386 PQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRPCSLSVHIDKGFTLWAAEPGAARAVLLRQPF 450
            .::|:.||..||||||.|||.||||.|||:|||:.|.||||||:||:|:..:.|..::|||:|||
Zfish   360 AKDLSCWTHLLVDGCHSAAELVQEVITACSWNGKSCMLSVHIDRGFSLFMEDCGVKKSVLLQQPF 424

Human   451 EKLQMSSDDGASLLFLDFGGAEGEIQLDLHSCPKTIVFIIHSFLSAKVTRLGLLA 505
            |:|:||||||..::||||||.:.||||||||||||:||||||||||||.||||||
Zfish   425 ERLRMSSDDGVRMIFLDFGGPDAEIQLDLHSCPKTMVFIIHSFLSAKVKRLGLLA 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNTA1NP_003089.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 8/23 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..77 13/41 (32%)
PDZ_syntrophin-like 86..168 CDD:467262 68/81 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..210 11/29 (38%)
PHsplit_syntrophin <209..270 CDD:269960 24/60 (40%)
PH 298..401 CDD:459697 55/102 (54%)
Calmodulin-binding. /evidence=ECO:0000250 483..505 19/21 (90%)
snta1XP_073810883.1 None

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