Protein Alignment SNRPN and snrpb

DIOPT Version :10

• Sequence 1: NP_001365180.1
• Gene: SNRPN / 6638
• HGNCID: 11164
• Length: 244
• Species: Homo sapiens
• Sequence 2: NP_001001198.1
• Gene: snrpb / 407857
• XenbaseID: XB-GENE-5877283
• Length: 237
• Species: Xenopus tropicalis
• Alignment Length: 239
• Identity: 216/239 - (90%)
• Similarity: 223/239 - (93%)
• Gaps: 3/239 - (1%)

Human     6 TVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 70
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||
 Frog     2 TVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPEREEKRV 66

Human    71 LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPV 135
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|:|||||||||||
 Frog    67 LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGAPMPQAPAGLAGPV 131

Human   136 RGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMR 200
            |||||||||||||||||.|||||.|||||||||||.|..|||.||||:||..||||:|.||||||
 Frog   132 RGVGGPSQQVMTPQGRGNVAAAAAAATASIAGAPTPYAAGRGGPPPPMGRGAPPPGMMGPPPGMR 196

Human   201 PPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPRP 244
            ||||||:|:||.||.|:||||||||||||   |||||||||.||
 Frog   197 PPMGPPMGMPPGRGGPMGMPPPGMRPPPP---GPPPPGMRPTRP 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SNRPN	NP_001365180.1	Sm_B	9..87	CDD:212464	76/77 (99%)
snrpb	NP_001001198.1	Sm_B	5..83	CDD:212464	76/77 (99%)