Protein Alignment Chmp4c and shrb

DIOPT Version :10

• Sequence 1: NP_079795.1
• Gene: Chmp4c / 66371
• MGIID: 1913621
• Length: 232
• Species: Mus musculus
• Sequence 2: NP_610462.3
• Gene: shrb / 35933
• FlyBaseID: FBgn0086656
• Length: 226
• Species: Drosophila melanogaster
• Alignment Length: 234
• Identity: 117/234 - (50%)
• Similarity: 158/234 - (67%)
• Gaps: 12/234 - (5%)

Mouse     1 MSKLGKFFKGTRSSRARAAPSAQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKRAA 65
            ||..||.|.|    :...||:..||:.:|||||.||.||||:||.:|:.||.:|:|:.|:|||.|
  Fly     1 MSFFGKMFGG----KKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKRVA 61

Mouse    66 LQALKRKKRFEKQLTQVDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHDNMDLNKIDD 130
            |||||:|||.||||.|:||||||||.||||||:::|||.||..|..||.|:|..|.|||::|:.|
  Fly    62 LQALKKKKRLEKQLQQIDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHD 126

Mouse   131 LMQDITEQQDIAQEISEAFSQRVQFADGFDEAELLAELEELEQEELNKKMTSLELPNVPSSSLPA 195
            :|.||.||||:|:|||:|.|..|.|....|:.:|..||:|||||..:|::  :.:|. |:.:||.
  Fly   127 MMDDIAEQQDVAREISDAISNPVAFGADLDDEDLERELDELEQENFDKEI--IGIPE-PTPTLPE 188

Mouse   196 QPSRKASMPSSVHRSRAASSRRAEEDD---DFKQLAAWA 231
            .|:.  .:|......:.|::..|.|||   |.|||.:|:
  Fly   189 APTE--DLPEKAKEKKKATTTTAVEDDDDPDMKQLLSWS 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chmp4c	NP_079795.1	Intramolecular interaction with C-terminus. /evidence=ECO:0000250	1..153		89/151 (59%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..23		8/21 (38%)
		Snf7	24..190	CDD:460896	94/165 (57%)
		Intramolecular interaction with N-terminus. /evidence=ECO:0000250	154..232		27/81 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	177..232		17/58 (29%)
shrb	NP_610462.3	Snf7	20..193	CDD:460896	98/177 (55%)