| Sequence 1: | NP_003081.2 | Gene: | SNRPA1 / 6627 | HGNCID: | 11152 | Length: | 255 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_015111.1 | Gene: | LEA1 / 855888 | SGDID: | S000006134 | Length: | 238 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 253 | Identity: | 65/253 - (25%) |
|---|---|---|---|
| Similarity: | 107/253 - (42%) | Gaps: | 43/253 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Human 2 VKLTAELIEQAAQY-------------TNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNE 53
Human 54 IRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPC-LTELILTNNSLVELGDLDPL----ASLK 113
Human 114 SLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLA------K 172
Human 173 DIARRSKT---FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSG 227 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SNRPA1 | NP_003081.2 | LRR_9 | 1..175 | CDD:405295 | 50/196 (26%) |
| LRR 1 | 20..41 | 5/20 (25%) | |||
| leucine-rich repeat | 22..43 | CDD:275378 | 3/20 (15%) | ||
| LRR 2 | 43..64 | 2/20 (10%) | |||
| leucine-rich repeat | 44..65 | CDD:275378 | 2/20 (10%) | ||
| LRR 3 | 65..86 | 6/20 (30%) | |||
| leucine-rich repeat | 66..89 | CDD:275378 | 7/22 (32%) | ||
| LRR 4 | 89..110 | 8/25 (32%) | |||
| leucine-rich repeat | 90..114 | CDD:275378 | 9/27 (33%) | ||
| leucine-rich repeat | 115..127 | CDD:275378 | 4/11 (36%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 174..201 | 5/29 (17%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 222..255 | 3/6 (50%) | |||
| LEA1 | NP_015111.1 | leucine-rich repeat | 54..75 | CDD:275378 | 2/20 (10%) |
| LRR_9 | <57..179 | CDD:405295 | 38/127 (30%) | ||
| leucine-rich repeat | 76..97 | CDD:275378 | 8/23 (35%) | ||
| leucine-rich repeat | 98..116 | CDD:275378 | 7/17 (41%) | ||
| leucine-rich repeat | 117..150 | CDD:275378 | 11/35 (31%) |