DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAPC4 and Pbp95

DIOPT Version :10

Sequence 1:NP_003077.2 Gene:SNAPC4 / 6621 HGNCID:11137 Length:1469 Species:Homo sapiens
Sequence 2:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster


Alignment Length:657 Identity:138/657 - (21%)
Similarity:238/657 - (36%) Gaps:177/657 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    52 DPADPPISEEERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQ----EVIQEKLAEANLLLAQNR 112
            |..|..|::::...|.|    .....|........||||...|    :|..:.||...::.|:..
  Fly     3 DADDLRINQQQLMDEIS----ALLQNTAKPSAANALQLNQELQRRLMQVRTKILAMLQVVRARFS 63

Human   113 EQQEELMR-------------DLAGS---KGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPA 161
            ..::.|:|             :|:|:   |||          ..:.|:.   :|:| :.|...|.
  Fly    64 RNEDILVRRLRPRSHFGPNSLNLSGAILRKGT----------FRFKGNL---FFRD-IDGRSCPN 114

Human   162 NEDTREKAAQGIKAFEELLVTKWKNWEK----ALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKV 222
            |||..      .:...|:..|.:....:    .|.:|:|:....|:||:.:      .|...:..
  Fly   115 NEDYE------ARCHTEMFPTDFDMHSRHVWTLLDKKNVIMGIKQQLLEHR------AHSTNALP 167

Human   223 SSELERQALEKQGREAEKEIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNS 287
            |..|:|:.:|:.          ::.|.......:...|.||.:||.::.|...|.......|:..
  Fly   168 SGSLKRKPIERH----------LSTLVSLLATADSSFSIDWNQISTLDLEYRHSPYSCEAMWRVY 222

Human   288 EHPSINKQEWSREEEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKAL----KRKE 348
            ..|.:.:.:||.||:|.|.|:|.|:....|:.||..| ..||.:||..:|....:.|    ....
  Fly   223 LTPDLRRDDWSPEEDETLLAVATANRMQNWELIAASL-DRRSDYQCFVRFHTALRFLLEPKNSHR 286

Human   349 WTEEEDRMLTQLVQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLL 413
            |:||::..|..:|......|.|.::::|.|...:....||.|:...|.|.:....:..:||..|.
  Fly   287 WSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMMLF 351

Human   414 QAVAKYGEQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAK 478
            .||.:|..:.....|...|.||..|.|.||...|....|...|:::::.:|:..:.:||...|..
  Fly   352 AAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQWLN 416

Human   479 IASELPHRSGSQCLSKWKIMM--------GKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSS 535
            .|:.|.:.:.:.|.:::.::.        .|.:.|.|||                         |
  Fly   417 CATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVEDLPRRR-------------------------S 456

Human   536 SSSSSSSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP 600
            ...|..:.::..::.|..:.|     |:.:|.|                              :|
  Fly   457 KKVSLVNSDNWAQRLQEWQED-----PESLVND------------------------------NP 486

Human   601 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQALEGGRR 665
            |||:                            |..||..:.|:           .|:|| |...|
  Fly   487 PKGT----------------------------RVRGPKSKKAR-----------IERQA-ESFSR 511

Human   666 LLTVPVE 672
            |..|.:|
  Fly   512 LSKVDIE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAPC4NP_003077.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..82 6/29 (21%)
SNAPC5-binding. /evidence=ECO:0000269|PubMed:11056176 84..133 16/68 (24%)
SANT <262..305 CDD:473887 13/42 (31%)
Myb_DNA-bind_6 297..357 CDD:372817 22/63 (35%)
SANT 346..397 CDD:197842 13/50 (26%)
PLN03091 399..>502 CDD:215570 24/110 (22%)
SANT 401..448 CDD:197842 14/46 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..558 9/56 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..661 11/83 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..710
PHA03247 <817..1215 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..894
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 932..981
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1001..1051
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1121..1167
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1184..1266
SNAPC2-binding. /evidence=ECO:0000269|PubMed:11056176 1281..1393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1430..1449
Pbp95NP_649760.1 SANT <194..240 CDD:473887 14/45 (31%)
SANT 229..276 CDD:197842 18/47 (38%)
Myb_DNA-bind_6 287..350 CDD:372817 16/62 (26%)
SANT 392..438 CDD:197842 8/45 (18%)
Blue background indicates that the domain is not in the aligned region.

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