DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMS and sms

DIOPT Version :10

Sequence 1:NP_004586.2 Gene:SMS / 6611 HGNCID:11123 Length:366 Species:Homo sapiens
Sequence 2:NP_001245351.1 Gene:sms / 100497747 XenbaseID:XB-GENE-953534 Length:366 Species:Xenopus tropicalis


Alignment Length:11 Identity:6/11 - (54%)
Similarity:8/11 - (72%) Gaps:1/11 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    53 IVCLIQT-KGD 62
            :.||:|| .||
 Frog    10 LFCLVQTNSGD 20

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMSNP_004586.2 SpmSyn_N 21..117 CDD:465581 6/11 (55%)
Spermine_synt_N 123..172 CDD:407397
Spermine_synth 175..365 CDD:396237
smsNP_001245351.1 SpmSyn_N 21..116 CDD:465581 6/11 (55%)
Spermine_synt_N 122..171 CDD:407397
AdoMet_MTases 174..360 CDD:473071
Blue background indicates that the domain is not in the aligned region.

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