DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMPD1 and Smpd1

DIOPT Version :10

Sequence 1:NP_000534.3 Gene:SMPD1 / 6609 HGNCID:11120 Length:631 Species:Homo sapiens
Sequence 2:NP_035551.1 Gene:Smpd1 / 20597 MGIID:98325 Length:627 Species:Mus musculus


Alignment Length:633 Identity:519/633 - (81%)
Similarity:556/633 - (87%) Gaps:8/633 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRYGASLRQSCPRSGREQGQDGTAGAP--GLLWMGLVLALALALALALALSDSRVLWAPAEAHP 63
            ||.:.||..|...|:|.||..:.:..||  ||||||      |.|||.|||.||.|||.||.|:|
Mouse     1 MPHHRASSGQDHLRAGWEQRLERSLPAPRVGLLWMG------LGLALVLALFDSTVLWVPARAYP 59

Human    64 LSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIA 128
            |..:||..:...|.|.|:..|||.|||||.||.||||:|.|||||||||||||||||:|.:|.||
Mouse    60 LPSEGHSVKFSAIAPPLQSAFGWQNLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIA 124

Human   129 PPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPPPKPPSP 193
            |..||||.|||||||:||||.||||||||||||||||:||||||||:||||||:|||||||||||
Mouse   125 PLDVCQSAVHLFEDDVVEVWTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPPPKPPSP 189

Human   194 PAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRT 258
            |||||||||:||||||||||:|||||||.||||||||||||.||.|:.|||:|||||||||||||
Mouse   190 PAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRT 254

Human   259 LESLLSGLGPAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHES 323
            |||||.||||||||:||||||||||||||.|:||||||||||:|.||||||||||||||||||||
Mouse   255 LESLLKGLGPAGPFEMVYWTGDIPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHES 319

Human   324 TPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCS 388
            ||||.||||||:||.||:||||||||||||||||:||.||||||||||:|.||||||||||||||
Mouse   320 TPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFCS 384

Human   389 RENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLA 453
            |||||||||||||||||||||.||||||:|||||||||||||||||||||||||:|:||||||||
Mouse   385 RENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLA 449

Human   454 AQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHET 518
            .||||||||||||:||||||||||||||||||||||:|.||||||||||||||.|||||||||||
Mouse   450 GQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFINLNPGYRVYQIDGNYPGSSHVVLDHET 514

Human   519 YILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPS 583
            |||||||||..|..|.|:.|||||||||||:.:|.:|||||||||.|.|||||||||||||||||
Mouse   515 YILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPS 579

Human   584 EPCGTPCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631
            |||||||||||||||||||||||||||||||:||||:|..||.|||.|
Mouse   580 EPCGTPCRLATLCAQLSARADSPALCRHLMPNGSLPDANRLWSRPLLC 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMPD1NP_000534.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 9/21 (43%)
SapB 89..162 CDD:214797 59/72 (82%)
MPP_ASMase 203..498 CDD:277321 264/294 (90%)
ASMase_C 476..597 CDD:466022 103/120 (86%)
Smpd1NP_035551.1 SapB 85..158 CDD:214797 59/72 (82%)
MPP_ASMase 199..494 CDD:277321 264/294 (90%)
ASMase_C 472..593 CDD:466022 103/120 (86%)

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