DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMPD1 and asm-2

DIOPT Version :10

Sequence 1:NP_000534.3 Gene:SMPD1 / 6609 HGNCID:11120 Length:631 Species:Homo sapiens
Sequence 2:NP_509894.2 Gene:asm-2 / 181323 WormBaseID:WBGene00000212 Length:618 Species:Caenorhabditis elegans


Alignment Length:628 Identity:223/628 - (35%)
Similarity:336/628 - (53%) Gaps:63/628 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    30 LLWMGLVLALALALALALALSDSRVLWAPAEAHP----LSPQGHPARL----HRIV--------- 77
            :|.:|:||||       ::..:|.||..|.:.|.    .:.:|:.|.:    ::::         
 Worm     7 ILGIGIVLAL-------VSNVESGVLRKPVDEHEYEKWTNARGNEAAVPPPKYKMLRYAKKAINE 64

Human    78 PRLRDVFGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFED 142
            |..|      .::|..|......:...:.:......:.:..:.||:|..:..|.||::|::.|:|
 Worm    65 PENR------KMSCLFCTFAVDGVQALIAQNSTDNEIAAFLVNLCDLFDVEQPHVCKNIIYAFKD 123

Human   143 DMVEVWRRSVLSPSEACGLLLGSTCGHWD--IFSSWNISLPTVPKPPPKP-PSPPAPGAPVSRIL 204
            ::|.|..|||.:|.|.||..: :.|||.|  :...|||::|. .|||.|| |..| ...|..::|
 Worm   124 EVVFVLERSVFTPEEICGAFI-ANCGHSDKPLTHMWNITIPG-GKPPIKPWPKIP-DNKPTFKVL 185

Human   205 FLTDLHWDHDYLEGTDPDC-------ADPLCCRRGS----GLP------PASRPGAGYWGEYSKC 252
            .|:|:|.||.|:.||:..|       ...:|||..|    |.|      |...| ||.||....|
 Worm   186 HLSDIHIDHQYVVGTEAYCQLDSALGTYAMCCRDYSQDSQGAPTNLKDKPIYVP-AGPWGMPYLC 249

Human   253 DLPLRTLESLLSGLGPA-GPFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYP 316
            |||.:|.||.:..:... ...|.:..|||..|||.|..|.......:..:|.:..::...||||.
 Worm   250 DLPYQTFESAMKHISKTFKDLDYIIITGDFEAHDSWDYTEDLTRENMNNMTNVFLEYFPGVPVYV 314

Human   317 AVGNHESTPVNSFPPPFIE--GNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRL 379
            ::||||..|.::..|..:.  .....:|||:.|::.|..|:|.|||.|::....||:.|.|||:|
 Worm   315 SIGNHEGVPQDAMAPHTMPEYDTRGPQWLYKIMSEMWSHWIPQEALDTVQYRASYAVYPKPGLKL 379

Human   380 ISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPG--HCLKSWSWNYY 442
            ||||..:||..||:|.:|..||...|:||:.|||.:|::|:.||||.|||||  :|||.||||::
 Worm   380 ISLNTIYCSEFNFYLYVNEVDPDATLEWLIEELQDSENKGELVHIISHIPPGDNYCLKGWSWNFF 444

Human   443 RIVARYENTLAAQFFGHTHVDEFEVFYD-EETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNY 506
            .||.|||||:|..|:||||.|:|.|:|| ::...||....:::||.|||..|||.||:|:|||.|
 Worm   445 EIVKRYENTIAQMFYGHTHYDQFMVYYDMDDPNRRPFHFNWISPSLTTYDWLNPAYRIYEIDGGY 509

Human   507 SGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQT 571
            .|:::.|.|.:||..|:|:||:....|.|.|.|..||.|.:.:..|.:|.:|..::..:..||:.
 Worm   510 EGATYTVKDAKTYFANVTEANMKNKEPEWVLSYDTREHYQMADFSPQSWSDLSDKLWTNTTLFRD 574

Human   572 FWFLYHKGHPPSEPCGT--PCRLATLCAQLSARADSPALCRHL 612
            :..||::.|..:| |.|  .||...:|.....|:...:.|.||
 Worm   575 YVRLYYRNHYNNE-CYTDYKCRYTFVCDIKKGRSYDESFCDHL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMPD1NP_000534.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SapB 89..162 CDD:214797 20/72 (28%)
MPP_ASMase 203..498 CDD:277321 131/317 (41%)
ASMase_C 476..597 CDD:466022 46/122 (38%)
asm-2NP_509894.2 SapB 70..143 CDD:214797 20/72 (28%)
MPP_ASMase 184..501 CDD:277321 131/317 (41%)
ASMase_C 497..602 CDD:466022 39/105 (37%)
Blue background indicates that the domain is not in the aligned region.

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