DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMPD1 and smpd1

DIOPT Version :10

Sequence 1:NP_000534.3 Gene:SMPD1 / 6609 HGNCID:11120 Length:631 Species:Homo sapiens
Sequence 2:XP_002943546.1 Gene:smpd1 / 100487433 XenbaseID:XB-GENE-997694 Length:582 Species:Xenopus tropicalis


Alignment Length:564 Identity:350/564 - (62%)
Similarity:417/564 - (73%) Gaps:12/564 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    70 PARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQ 134
            |..||..:.:|...:||.||||||||.||.|:::.|:.:.|...|.|:|.::|..|::|.|:|||
 Frog    29 PPTLHSYLHQLGAGYGWRNLTCPICKVLFAALDISLEVDSNKEMVASLAERVCMALRLAEPSVCQ 93

Human   135 SIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPPPKPPSPPAPGAP 199
            ..:.||:.|::..|..|||.|||.||||:|:.||.|||.|:||||||..||||..||.||.||:|
 Frog    94 QTIQLFKKDIITAWVLSVLRPSEICGLLVGADCGVWDIGSNWNISLPNKPKPPVVPPVPPTPGSP 158

Human   200 VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPA-SRPGAGYWGEYSKCDLPLRTLESLL 263
            |||:|||||||||..||.|:...|.:|||||    :||| ::.||||||.||||||||.|:||||
 Frog   159 VSRVLFLTDLHWDRQYLPGSSASCQEPLCCR----MPPAHNQSGAGYWGTYSKCDLPLHTIESLL 219

Human   264 SGLGPAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNS 328
            ..:...||:..||||||||||:||.|||.|||.||.|:|.|:||:||.|||||||||||||||||
 Frog   220 RQVSAQGPYQAVYWTGDIPAHNVWQQTRADQLDALRTLTGLIRKYLGAVPVYPAVGNHESTPVNS 284

Human   329 FPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFW 393
            ||||:::||.||.|||.:||:.|..|||..||.|||..|||.:...|.|||:|||||||...|||
 Frog   285 FPPPYVQGNLSSHWLYHSMAQEWHHWLPQSALSTLRTAGFYTVPIGPRLRLVSLNMNFCDLGNFW 349

Human   394 LLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFG 458
            ||||.|||||||||||..||.||::|:|||||||||||.|||||||||||||.|||:|:||||||
 Frog   350 LLINYTDPAGQLQWLVEVLQEAEEKGEKVHIIGHIPPGLCLKSWSWNYYRIVNRYESTIAAQFFG 414

Human   459 HTHVDEFEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNL 523
            |||:||||:|||||||:||::|||::||.||:|.||||||||||||.|..|||:|||||||||||
 Frog   415 HTHLDEFEMFYDEETLTRPVSVAFISPSVTTFINLNPGYRVYQIDGEYPESSHMVLDHETYILNL 479

Human   524 TQANI-PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCG 587
            |:||. ||..|.|.|||||.||||:.:..|..|..|..|...|.:||||||:|:|||| ..|.|.
 Frog   480 TEANARPGQDPRWTLLYRALETYGMKSAFPADWELLTRRFLQDERLFQTFWYLHHKGH-VDEVCQ 543

Human   588 TPCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631
            ..|:...|||..|.|:..|.||:.|:..|     :.||.|..||
 Frog   544 ENCKTTLLCALRSGRSSDPELCKDLLLPG-----KPLWERKQFC 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMPD1NP_000534.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SapB 89..162 CDD:214797 34/72 (47%)
MPP_ASMase 203..498 CDD:277321 207/295 (70%)
ASMase_C 476..597 CDD:466022 73/121 (60%)
smpd1XP_002943546.1 SapB 48..121 CDD:214797 34/72 (47%)
MPP_ASMase 162..454 CDD:277321 207/295 (70%)
ASMase_C 432..554 CDD:466022 74/122 (61%)
Blue background indicates that the domain is not in the aligned region.

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