DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMO and fz

DIOPT Version :9

Sequence 1:NP_005622.1 Gene:SMO / 6608 HGNCID:11119 Length:787 Species:Homo sapiens
Sequence 2:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster


Alignment Length:598 Identity:166/598 - (27%)
Similarity:262/598 - (43%) Gaps:126/598 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    39 PGPRSAGG-SARRSAAVTGPPPPLSHCGRAAPCEPLRYNVCLGSVLPYGAT-STLLAGDSDSQEE 101
            |..||.|| .|.....:.|.|    |..|   |||:..::|..  :||..| ...|.|.: .|||
  Fly    28 PYYRSGGGLMASSGTELDGLP----HHNR---CEPITISICKN--IPYNMTIMPNLIGHT-KQEE 82

Human   102 AHGKLVLWSGL---RNAP----RCWAVIQPLLCAVYMPKCE-NDRVELPSRTLCQATRGPCAIVE 158
            |        ||   :.||    .|...:|..||::|:|.|. .:|...|.|:||::.|    :.|
  Fly    83 A--------GLEVHQFAPLVKIGCSDDLQLFLCSLYVPVCTILERPIPPCRSLCESAR----VCE 135

Human   159 R-----ERGWPDFLRCTPDRFP----------EGCTNEV-------------------------- 182
            :     ...||:.|.|:  :||          |..|:..                          
  Fly   136 KLMKTYNFNWPENLECS--KFPVHGGEDLCVAENTTSSASTAATPTRSVAKVTTRKHQTGVESPH 198

Human   183 QNIKFNSSGQCEVPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLF 247
            :||.|....|.:.||......|...:|:..||..|....|.|.|...:..::.::.||.....||
  Fly   199 RNIGFVCPVQLKTPLGMGYELKVGGKDLHDCGAPCHAMFFPERERTVLRYWVGSWAAVCVASCLF 263

Human   248 TLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRA--DGTMRLGE----- 305
            |:.||:.| .:..|||...:.::..|:.|....::|..  ||...:.||.  ...::||.     
  Fly   264 TVLTFLID-SSRFRYPERAIVFLAVCYLVVGCAYVAGL--GAGDSVSCREPFPPPVKLGRLQMMS 325

Human   306 ---PTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTT--YQPLSGKTSYFHLLTW 365
               ....:|.||.::|:.:|:..||...|:..|.:||   |.|.|..  ::.:..|:..|||:.|
  Fly   326 TITQGHRQTTSCTVLFMALYFCCMAAFAWWSCLAFAW---FLAAGLKWGHEAIENKSHLFHLVAW 387

Human   366 SLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIK 430
            ::|.:.|:::||:|:|:||.:||:||||..:......|::.|:.:.|.:|..||:.|.::||.|:
  Fly   388 AVPALQTISVLALAKVEGDILSGVCFVGQLDTHSLGAFLILPLCIYLSIGALFLLAGFISLFRIR 452

Human   431 S--NHPGLLSEKAASKINETMLRLGIFGFLAFGFVLIT---FSCHFYDFFNQAEWERSF-RDY-- 487
            :  ...|    |...|:...|||:|.|..|   |:|..   ..|.||:::|..||...: ||.  
  Fly   453 TVMKTDG----KRTDKLERLMLRIGFFSGL---FILPAVGLLGCLFYEYYNFDEWMIQWHRDICK 510

Human   488 ---VLCQANVTIGLPTKQPIPDC-EIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRT 548
               :.|.|....|.|..:||... .:|...|:||           |:..|.|:::..|::.||..
  Fly   511 PFSIPCPAARAPGSPEARPIFQIFMVKYLCSMLV-----------GVTSSVWLYSSKTMVSWRNF 564

Human   549 WCRLTGQSDDEPK 561
            ..||.|:   ||:
  Fly   565 VERLQGK---EPR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMONP_005622.1 CRD_SMO 66..196 CDD:143560 44/179 (25%)
Frizzled 221..550 CDD:279827 101/352 (29%)
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 38/135 (28%)
Frizzled 237..564 CDD:279827 101/350 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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