DRSC/TRiP Functional Genomics Resources

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Protein Alignment BOLL and Hrb27C

DIOPT Version :10

Sequence 1:XP_047301536.1 Gene:BOLL / 66037 HGNCID:14273 Length:345 Species:Homo sapiens
Sequence 2:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster


Alignment Length:306 Identity:67/306 - (21%)
Similarity:102/306 - (33%) Gaps:114/306 - (37%)


- Green bases have known domain annotations that are detailed below.


Human     4 ESGPQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQY 68
            ::||.|     .|..:..|.|.:|..|..|.....|      ::|:||:.....|:|||.||::|
  Fly    66 QNGPHT-----LDGRTIDPKPCNPRTLQKPKKGGGY------KVFLGGLPSNVTETDLRTFFNRY 119

Human    69 GSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNI--------------- 117
            |.|.||.|:.|: ...|:|:||::||.:...:.:..| ..:|...|::.|               
  Fly   120 GKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-RYINLNGKQVEIKKAEPRDGSGGQNSN 183

Human   118 ------------------------------------GPAIRKQQVGIPRSSIMPAA---GTMYLT 143
                                                ||.: ...:|.|  ::||..   ||....
  Fly   184 NSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPL-NMPIGAP--NMMPGYQGWGTSPQQ 245

Human   144 TSTGY----PYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSPVMVAQPIYQQPAYHYQGIKQCHTR 204
            ...||    |.:|....|   .|.....||.|.                     :|.|.:|....
  Fly   246 QQYGYGNSGPGSYQGWGA---PPGPQGPPPQWS---------------------NYAGPQQTQGY 286

Human   205 RWMDSLLPFTKCDEATTQYLP------GQW-QWSVPQPSA--SSAP 241
            ...|..       .:|:...|      |.| .|::|..||  :.||
  Fly   287 GGYDMY-------NSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAP 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BOLLXP_047301536.1 RRM_BOULE 43..123 CDD:410074 28/131 (21%)
PRK10263 <124..>309 CDD:236669 29/134 (22%)
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763 4/18 (22%)
RRM2_DAZAP1 94..173 CDD:409765 27/85 (32%)

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