DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMARCC2 and mor

DIOPT Version :10

Sequence 1:NP_001317217.1 Gene:SMARCC2 / 6601 HGNCID:11105 Length:1245 Species:Homo sapiens
Sequence 2:NP_524373.1 Gene:mor / 41942 FlyBaseID:FBgn0002783 Length:1209 Species:Drosophila melanogaster


Alignment Length:1294 Identity:568/1294 - (43%)
Similarity:746/1294 - (57%) Gaps:262/1294 - (20%)


- Green bases have known domain annotations that are detailed below.


Human     5 KKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYI--QAEPPTNKSLSSLVVQLLQFQEEVFGKH 67
            ||||.||:.::::.:|:..|:::|.||.||.|||:  .:||.|.:||:.|::..||:.|...||:
  Fly     7 KKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKN 71

Human    68 VSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDF---QNPSRMDRNVEMFMTIEK 129
            .::.|.|::|::||||||:||.||.|.:..::|:::|..:::||   :||:|.|.|:::.:.||:
  Fly    72 SADPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQ 136

Human   130 SLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEWVRPV 194
            :||:.:....|.|::.||||....|||::|:...:..:..|:.:|:|:||||. :...:|:.||:
  Fly   137 ALVEADLYRIPYIYIRPEIEKGFEGKLREILDNRRVEIVSDEEDATHIVYPVV-DPHPDEYARPI 200

Human   195 MKRDKQVLLHWGYYPDSYDTW----------IPASEIEASVEDAPTPEKPRKVHAKWILDTDTFN 249
            .||...|:|||.|:|:|||:|          ||        |:..:|.:..:|.|.||:|.:.:|
  Fly   201 FKRGGHVMLHWYYFPESYDSWAVNNFDLPDHIP--------ENPESPAERWRVSASWIVDLEQYN 257

Human   250 EWMNEEDYEVNDDKNPVSRRKKISAKTLT---DEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEA 311
            |||.||||||::.....:.::::|...:.   ||...|.:    ..||..:||:|||||:.:...
  Fly   258 EWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPAA----SSGGGKQKRRRSPSPASSAST 318

Human   312 KKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEV-----TLPKTVN------TKK 365
            .|...:|  .:|....|:...:::.||||:|:|:|...|||:||     .|..|.:      ::.
  Fly   319 SKPGKRK--RSPAVVHKKSRNDDDDEDLTRDLDDPPAEPNVQEVHKANAALQSTASPAPGGKSRG 381

Human   366 DSESAPVKGGTMTDLDEQ-----EDESMET-------TGKDEDENSTGNKGEQTKNPDLHEDNVT 418
            |::..|:|||||||||::     ..::|.|       |||..|.::|.......|. |: |||||
  Fly   382 DNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKE-DM-EDNVT 444

Human   419 EQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS 483
            |||||||:|||:|||||||:|.||:||:|||||.||||||||||:||||||||||||||.|||||
  Fly   445 EQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTS 509

Human   484 TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQP-K 547
            ||||||||||||||||||||||||||||||:||:.||||||||||||||:|:||||||..:.| |
  Fly   510 TACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADVRPTPMGPPPTSHFHILSDTPSGLQSINPQK 574

Human   548 TPQGRQ----VDADTKAGRK--GKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNF 606
            |.|...    :|.|.|...|  |.||.|....|......|:..|:..:          .:.:..|
  Fly   575 TQQPSAAKTLLDLDKKPLGKDGGLELGDKSGLTGIKTEALENGAAGGL----------SSGVSQF 629

Human   607 GLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFL 671
            ||:.|.|.||....:::.|||..||||:||||||||.|||:|||||||.||||||||||||||||
  Fly   630 GLKLDQYAKKPAAMRNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFL 694

Human   672 RLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 736
            |||||||||||....|||||.||||||:||||:||||||||||||||||:||||:|:|||:.:|:
  Fly   695 RLPIEDPYLEDDGGFLGPLACQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKD 759

Human   737 EVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKK 801
            |||..:::.|::.||:|: ..||.:|.|||.:||||||           |||            |
  Fly   760 EVPATIMDNHLKNVEKAS-AGGKFNPNFGLANSGIAGT-----------GND------------K 800

Human   802 EPKEPREGG-----GAIEEEAKE---KTSEAPKKDEEK------------------GKEGDSEKE 840
            :.:|.:|||     |..:||.|:   |..:|..||..|                  |...:::|:
  Fly   801 DDEEGKEGGASASAGGSDEEMKDLSKKDDDAKSKDNTKSDKTNTNTDSSSTSSSATGNTNNTDKK 865

Human   841 SEKSDG-DPIVDPEKEKEPKE--------------GQEEVLKEVVESEGERKTKVERDIG----- 885
            .::|.| .|..|....|..|.              |:.::..|....:||.|...|...|     
  Fly   866 PKESSGSSPSGDKSAIKSDKSNKSSPTETAAAASGGEVDIKTEDSSGDGETKDGTEAKEGTGTGT 930

Human   886 ------------EGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFE 938
                        |.|:.||||||||:||||||||||:||||||||||||||||||||||||||||
  Fly   931 GPLAVPKEGTFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFE 995

Human   939 ELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQ---------------- 987
            |||..|:||||.||||||||:.:||.||:||||.||.|||||...::.|                
  Fly   996 ELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQGQAAAGSMILPQQ 1060

Human   988 -----------------------QQQQPPP---ALPPGSQPIPPTGAAGPPAVHGLAVAPASVVP 1026
                                   ||||.||   .|||.|||:     |||.|.|  ...|..||.
  Fly  1061 QQLPQAQQPQQQQQTLPPHPHLAQQQQLPPHPHQLPPQSQPL-----AGPTAQH--QPLPPHVVS 1118

Human  1027 APAGS--GAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVP------PPGPHGP---- 1079
            :|.|:  .|||.||                         .|.:|||.|      |....||    
  Fly  1119 SPNGAPFAAPPISL-------------------------TGGLPPGAPTAIVTNPSDQTGPVAAG 1158

Human  1080 -----SPFPNQQTPPSMMP----GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIP 1129
                 :|.|...||||..|    .|.|||..|          |.|:||....|...:.|
  Fly  1159 AAQSQAPTPMDTTPPSSGPVSDANAPPGSAMP----------PGGIPPANTAPIAGVAP 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMARCC2NP_001317217.1 SWIRM-assoc_2 4..420 CDD:465143 161/455 (35%)
RSC8 379..>739 CDD:227584 241/378 (64%)
SWIRM-assoc_3 715..781 CDD:465145 34/65 (52%)
PTZ00121 <721..978 CDD:173412 135/314 (43%)
SWIRM-assoc_1 <911..977 CDD:465142 54/65 (83%)
PHA03247 <999..1234 CDD:223021 44/152 (29%)
morNP_524373.1 SWIRM-assoc_2 6..446 CDD:465143 161/455 (35%)
RSC8 417..>742 CDD:227584 223/336 (66%)
SWIRM-assoc_3 738..803 CDD:465145 38/88 (43%)
DUF4670 <863..1049 CDD:464815 94/185 (51%)
SWIRM-assoc_1 962..1031 CDD:465142 57/68 (84%)
PHA03247 <1100..1209 CDD:223021 43/150 (29%)

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