DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMARCC1 and mor

DIOPT Version :10

Sequence 1:NP_003065.3 Gene:SMARCC1 / 6599 HGNCID:11104 Length:1105 Species:Homo sapiens
Sequence 2:NP_524373.1 Gene:mor / 41942 FlyBaseID:FBgn0002783 Length:1209 Species:Drosophila melanogaster


Alignment Length:1232 Identity:538/1232 - (43%)
Similarity:725/1232 - (58%) Gaps:196/1232 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    33 RKDGGPATKFWESPETVSQLDSVRVWLGKHYKKYV-HADAP-TNKTLAGLVVQLLQFQEDAFGKH 95
            :|||.|...|::||||:...:|:|.||.|:.|||: |:..| |.::||.|::..||:.|...||:
  Fly     7 KKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKN 71

Human    96 VTNPAFTKLPAKCFMDFKAGGALCHILGAAYKYKNEQGWRRFDL---QNPSRMDRNVEMFMNIEK 157
            ..:|..|::|.:||:|||:||.||.|....::::.||..::||.   :||:|.|.|:::.:.||:
  Fly    72 SADPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQ 136

Human   158 TLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPV 222
            .||:.:....|.||:.|:|:.....||::|:...:.....::..|:|.:||......| |:.||:
  Fly   137 ALVEADLYRIPYIYIRPEIEKGFEGKLREILDNRRVEIVSDEEDATHIVYPVVDPHPD-EYARPI 200

Human   223 MRKEKQVLVHWGFYPDSYDTWVHSN-DVDAEI-EDPPIPEKPWKVHVKWILDTDIFNEWMNEEDY 285
            .::...|::||.::|:|||:|..:| |:...| |:|..|.:.|:|...||:|.:.:||||.||||
  Fly   201 FKRGGHVMLHWYYFPESYDSWAVNNFDLPDHIPENPESPAERWRVSASWIVDLEQYNEWMAEEDY 265

Human   286 EVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANA----RKRKHSPSPPPPTPTESRKKSGKK 346
            ||||..|..:.:||:|.   :.:.|.....:|.:|::    :||:.|||   |..:.|..|.||:
  Fly   266 EVDEQGKKKTHKQRMSI---DDIMSFGDEKKKPAASSGGGKQKRRRSPS---PASSASTSKPGKR 324

Human   347 GQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKK------------DSENTP 399
            .::.....::|:.::|: ||||:|::||...||::| |...|..|:.            |::..|
  Fly   325 KRSPAVVHKKSRNDDDD-EDLTRDLDDPPAEPNVQE-VHKANAALQSTASPAPGGKSRGDNDMMP 387

Human   400 VKGGTVADLDEQ-------------DEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNHIII 451
            :||||:.|||::             |.|....|...|....:...|.:.:..||||||||:|||:
  Fly   388 IKGGTMTDLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIV 452

Human   452 PSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLT 516
            |||::|||||.|||||:||:|||||.||||||||||:||||||||||||||.||||||||||||.
  Fly   453 PSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLA 517

Human   517 GDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVP-AAQ 580
            |||||:||||||||||||:|||:|.:.||..||||||.||::|:||||||..::.:..|.| ||:
  Fly   518 GDVCAIMRVHAFLEQWGLINYQIDADVRPTPMGPPPTSHFHILSDTPSGLQSINPQKTQQPSAAK 582

Human   581 QMLNFPEK--NKEKPVDL--------------------------QNFGLRTDIYSKKTLA--KSK 615
            .:|:..:|  .|:..::|                          ..|||:.|.|:||..|  ...
  Fly   583 TLLDLDKKPLGKDGGLELGDKSGLTGIKTEALENGAAGGLSSGVSQFGLKLDQYAKKPAAMRNRT 647

Human   616 GASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGP 680
            .||..||||:||||||||.|||:|||||||.||||||||||||||||||||||||||:....|||
  Fly   648 AASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGP 712

Human   681 LAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAA 745
            ||.||:|||:||||:||||||||||||||||:||||||:|||:.:::|||..:::.|:|.|::|:
  Fly   713 LACQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHLKNVEKAS 777

Human   746 RASGKVDPTYGLESSCIAGTGPDEPEKLEGAE----------EEKME---------ADPDGQQPE 791
             |.||.:|.:||.:|.|||||.|:.:: ||.|          :|:|:         ...|..:.:
  Fly   778 -AGGKFNPNFGLANSGIAGTGNDKDDE-EGKEGGASASAGGSDEEMKDLSKKDDDAKSKDNTKSD 840

Human   792 KAENKVE------------NETDEGDKAQDGENEK------NSEKEQDSEVSE----------DT 828
            |.....:            |.||:..|...|.:..      .|:|...|..:|          |.
  Fly   841 KTNTNTDSSSTSSSATGNTNNTDKKPKESSGSSPSGDKSAIKSDKSNKSSPTETAAAASGGEVDI 905

Human   829 KSEEKETE-ENKELTDTCKERESDTGKKKVEHE--ISEGNVATAAAAALASAATKAKHLAAVEER 890
            |:|:...: |.|:.|:..:...:.||...|..|  .||.|:.|||||||||||.|||||||:|||
  Fly   906 KTEDSSGDGETKDGTEAKEGTGTGTGPLAVPKEGTFSENNMQTAAAAALASAAVKAKHLAALEER 970

Human   891 KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRAR 955
            ||||||||||||||||||||||||||||..|:||:|.||.|||||:||||.||:||||.||.|||
  Fly   971 KIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRAR 1035

Human   956 QQM--------------------EQQQ--HGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPP 998
            ||.                    :|||  ..|.|||..|     .|.|     ||.:...||.||
  Fly  1036 QQAHHRLQQELQGQAAAGSMILPQQQQLPQAQQPQQQQQ-----TLPP-----HPHLAQQQQLPP 1090

Human   999 YPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSG----------SGPTPPGM 1053
            :|   ||:||...|    :.||    ..||.|  :.|.|.::  |:|          :|..|||.
  Fly  1091 HP---HQLPPQSQP----LAGP----TAQHQP--LPPHVVSS--PNGAPFAAPPISLTGGLPPGA 1140

Human  1054 PPM----PGNILGPRVPLTAPNGMYPPPPQQQPPPPPPADGVPPPPA----PG--PPASAAP 1105
            |..    |.:..|| |...|.....|.|....||...|......||.    ||  |||:.||
  Fly  1141 PTAIVTNPSDQTGP-VAAGAAQSQAPTPMDTTPPSSGPVSDANAPPGSAMPPGGIPPANTAP 1201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMARCC1NP_003065.3 MarR-like, BRCT and chromo domains module. /evidence=ECO:0000255|PROSITE-ProRule:PRU01376 28..302 104/275 (38%)
SWIRM-assoc_2 32..445 CDD:465143 152/447 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..439 45/171 (26%)
RSC8 444..>710 CDD:227584 193/296 (65%)
SWIRM-assoc_3 706..772 CDD:465145 35/65 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 745..860 38/162 (23%)
SWIRM-assoc_1 883..954 CDD:465142 58/70 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 956..1028 26/93 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1041..1105 24/83 (29%)
morNP_524373.1 SWIRM-assoc_2 6..446 CDD:465143 152/447 (34%)
RSC8 417..>742 CDD:227584 201/324 (62%)
SWIRM-assoc_3 738..803 CDD:465145 35/65 (54%)
DUF4670 <863..1049 CDD:464815 97/185 (52%)
SWIRM-assoc_1 962..1031 CDD:465142 57/68 (84%)
PHA03247 <1100..1209 CDD:223021 34/115 (30%)

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