DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMARCA1 and CG10445

DIOPT Version :10

Sequence 1:NP_001269803.1 Gene:SMARCA1 / 6594 HGNCID:11097 Length:1070 Species:Homo sapiens
Sequence 2:NP_649751.2 Gene:CG10445 / 40938 FlyBaseID:FBgn0037531 Length:945 Species:Drosophila melanogaster


Alignment Length:933 Identity:202/933 - (21%)
Similarity:330/933 - (35%) Gaps:361/933 - (38%)


- Green bases have known domain annotations that are detailed below.


Human    28 QPGPSTSQEEGAAAAATEA---TAATEKGEKK--------KEKNVSSFQLKLAAKAPKSEKEMDP 81
            :|.|..|.|.....|..|:   .:|:|..|||        |...:...|.:|...|.::::..|.
  Fly    39 EPEPVDSLELSGEYADNESAIFVSASEYNEKKAQIDQLVQKILTMEQQQRQLEENASETKELCDL 103

Human    82 E-YEEKMKADRAKRFEFL----LKQ----------TELFAHFIQPSAQKSPTSPLNMKLGRPRIK 131
            : :.||:.|......|||    |::          :||..|..||.     .|.|...|.|.|  
  Fly   104 KLHLEKLNARLEALGEFLDTLRLREDQQEIKIEDNSELVDHTEQPK-----WSNLYSGLNRYR-- 161

Human   132 KDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIR-------FEVSPSYVKGGPLRDYQIR 189
              :|.:..:|..|:|:..        :.:|.||....|:       .|..|:.:....|: :|..
  Fly   162 --QKANHTAAQFYQHKSN--------IIDSLKTLYEPIQPRPAIDDLEKQPALLLVRLLK-HQQS 215

Human   190 GLNWLISLYENGVN-GILADEMGLGKTLQTIALL----------------------------GYL 225
            .|.|:.......:: |||||:|||||||..|||:                            .|.
  Fly   216 CLKWMQFRERQKISGGILADDMGLGKTLSMIALILASEETKNRKREEKKKALTLKWTQEFNRVYC 280

Human   226 KHYRNI----------------------------------------------------------- 231
            |..|.|                                                           
  Fly   281 KEIRKISMFDDEEESGKEEEQYEPPEKRTCHVKTKKINQFRILDDDDNDAGDKAVVEDEQKDLLA 345

Human   232 --PGPH---------------------MVLVPKSTLHNWMNEFKRWVP--SLRVICFVGDKDARA 271
              |.|.                     :|:.|.|.:..|.:|....|.  ::||:.|.|..    
  Fly   346 KTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPN---- 406

Human   272 AFIRDEMMPG-----EWDVCVTSYEMVIKEKSVFKKF---------HWRYLVIDEAHRIKNEKSK 322
               |.|:  |     .:|:.:|||.:|:.|   .|::         :|..:::||||.|:|.|:.
  Fly   407 ---RHEI--GIEAFRSYDLVITSYNLVVNE---LKRYGNTSPLFAVYWNRVILDEAHIIRNSKTN 463

Human   323 LSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFL-LPDVFNSADDFDSWFDTKNCLGDQKL-VE 385
            ....|.:.::.....|||||:||...:::|||.|: :|:.    .|...|   |..|.:..| ..
  Fly   464 CCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFVNVPNF----QDLQQW---KKNLNESMLGHR 521

Human   386 RLHAVLKPFLLRRIKTDVEKS-----LP-----------PKKEIKIYLGLSKMQREWYTKILMK- 433
            ||:.::||.:|||.|..::.|     ||           .|.|:.:|..||.:.::.:|:.|:: 
  Fly   522 RLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQR 586

Human   434 -----DID--------------------------VLNSSG-----KMDKMRLLNILMQLRKCCNH 462
                 |::                          .|.|.|     |:..:.:|.:|::||:.|.|
  Fly   587 EKGNSDLNYYSLERTPQFIAGHMSDERYNEIYERFLKSLGYNPGEKILGIYILVLLLRLRQFCCH 651

Human   463 PYLFDG----------------------------------------------------------- 468
            |.|..|                                                           
  Fly   652 PGLMIGMLRGALTAEDVQNVKVDASDVEGQLKMDVLAELDKFDETDSEDDCCDEEDSTRRDGNFK 716

Human   469 --------AEPGPPYTTDEHI----------------------------VSNSGKM-VVLDKLLA 496
                    .|...|:.:.:.:                            :..|.|: :|:|||..
  Fly   717 LEVIKDEIKEENVPWDSGDDLPTASSFEDQLDSARALKLLNPQNPIFQFIRPSAKLKMVIDKLEE 781

Human   497 KLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFN 561
            .|.....::::.||....|.|:........:|....:||...:|||            ..:..||
  Fly   782 LLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKERE------------IVLRDFN 834

Human   562 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDN 626
            | |:.|.:.:||..|||:|:||..|:.:::.|..||||::.||.||.:|.||.||..::|.:..:
  Fly   835 A-NNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQD 898

Human   627 TVEERIVERAEIKLRLDSIVIQQ 649
            |||:||....:.||.:..:|:.:
  Fly   899 TVEQRIKSLQDCKLEIAKVVLPE 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMARCA1NP_001269803.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..82 16/64 (25%)
PLN03142 87..1069 CDD:215601 184/862 (21%)
DEAH box 311..314 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 831..861
CG10445NP_649751.2 HepA <113..919 CDD:440319 182/855 (21%)
DEAD-like_helicase_N 209..534 CDD:475120 76/344 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.