Sequence 1: | NP_001269803.1 | Gene: | SMARCA1 / 6594 | HGNCID: | 11097 | Length: | 1070 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
Alignment Length: | 1252 | Identity: | 350/1252 - (27%) |
---|---|---|---|
Similarity: | 535/1252 - (42%) | Gaps: | 306/1252 - (24%) |
- Green bases have known domain annotations that are detailed below.
Human 30 GPSTSQEEGAAAAATEATAATEKGEKKKEKNVSSF----------------QLKLAAKAP----- 73
Human 74 ---KSEKEMDPEYEEKM-KAD-RAKRFEFLLKQTELFAH----FIQPSAQKSPTSP--------L 121
Human 122 NMKLGR-------------PRIKK------DEKQSLISAGDY----------------------- 144
Human 145 RHRRTEQEEDEE------LLSESRKTSNVCIRFEVSPSYVKGG--PLRDYQIRGLNWLISLYENG 201
Human 202 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGD 266
Human 267 KDARAAFIRDEMMPGE-----------------WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 314
Human 315 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG 379
Human 380 DQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKM 444
Human 445 DKMRLLNILMQLRKCCNHPYLFDGA------EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGS 503
Human 504 RVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKF 568
Human 569 IFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 633
Human 634 ERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESE----LTDEDITTILE 694
Human 695 RG----EKKTAEMNERL-----------QKMGESSLRNFRMDIEQS-------LYKFEGEDYREK 737
Human 738 --QKLGMVEWIEPPKRERK-ANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFEL 799
Human 800 LEKEILYYRKTIGYKVPR-----NPDIPNPALAQREEQKKIDGAE--PLTPEETEEKEKLLTQGF 857
Human 858 TNWTKRDFNQFIKANEKYGRDDIDN-----IAREVEGKSPEEVMEYSAVFWERCNE--------- 908
Human 909 ---------------------------LQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAP 946
Human 947 FHQLRI------------------------QYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEE 987
Human 988 LRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRATKTPMSQKRK 1052
Human 1053 AESATESSGKKDVKKVK 1069 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMARCA1 | NP_001269803.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 25..82 | 13/75 (17%) | |
PLN03142 | 87..1069 | CDD:215601 | 333/1169 (28%) | ||
DEAH box | 311..314 | 2/2 (100%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 819..849 | 6/31 (19%) | |||
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | |
PHD1_CHD_II | 380..422 | CDD:277006 | |||
PHD2_CHD_II | 440..482 | CDD:277007 | |||
CHROMO | 490..558 | CDD:237991 | 11/67 (16%) | ||
CHROMO | 615..667 | CDD:214605 | 10/51 (20%) | ||
SNF2_N | 734..1028 | CDD:278600 | 127/296 (43%) | ||
DEXDc | 751..907 | CDD:238005 | 60/155 (39%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 70/125 (56%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 14/62 (23%) | ||
DUF1086 | 1380..1517 | CDD:283992 | 23/139 (17%) | ||
CHDCT2 | 1756..1927 | CDD:285336 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.870 |